Gene
| Gene Model ID | pfu_aug2.0_1925.1_18598 |
|---|---|
| Locus | scaffold1925.1 : 22238 ... 28515 : - |
| To GenomeBrowser | scaffold1925.1:22238..28515 |
| Genes list of scaffold | scaffold1925.1 |
| Synonym | pfu_aug1.0_29042.1_55286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1925.1_18598.t1 | 2 | 1 | OTU | 259 | 359 | 2.8e-15 | 56.9 | 5.7e-19 | 2.8e-15 | 56.9 |
| pfu_aug2.0_1925.1_18598.t1 | 2 | 2 | OTU | 629 | 629 | 2.8e-15 | 56.9 | 3.0 | 15000.0 | -9.1 |
| pfu_aug2.0_1925.1_18598.t1 | 2 | 1 | Helitron_like_N | 631 | 637 | 4.5e-26 | 91.7 | 3.0 | 15000.0 | -7.7 |
| pfu_aug2.0_1925.1_18598.t1 | 2 | 2 | Helitron_like_N | 1028 | 1221 | 4.5e-26 | 91.7 | 9.0e-30 | 4.5e-26 | 91.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1925.1_18598.t1 | gi|528474906|ref|XP_005164252.1| | PREDICTED: uncharacterized protein LOC101882679 [Danio rerio] | 0.0 |
| pfu_aug2.0_1925.1_18598.t1 | gi|688549789|ref|XP_009298907.1| | PREDICTED: uncharacterized protein LOC101885563 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1925.1_18598.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1925.1_18598.t1 atgttaaacttttttatcgacaacatttttgtggtgtttggaggaaaggtcttccagcaaattgtcggaattccaatggg gaccaattgtgccccactccttgccgacatttttctttactcgtacgaagctgaattcattcaatcgccggtctctaaag ggaaaagatacttagcttctgacttcaacttcacttacagatacatagacgatgtgttgtccatcaataatacaaaattc gaggatttcctgagcagtatctatccttcagagcttgaagtcaaagaaactacagagacaaataattcagcatcctattt ggacataatgttgtcctacgaaactgatggtcacatgaacacctcactctatgacacacgtgacgacttcaatttcagca ttacaacctttccttttcttagtagcaacattcattcatcgcctgcttatggcgttttcatatctcagttgaaccgctat gccagagcaagtacgaaatatacggattttgttctgagagctaggcgtctttcagataagcttctcagtaagggatatgc ttgtgaccgactaacatcgtcactgaggaagttctacggtcgatatcaggaactcgtcatacactatgatgtcccactct ccagaatgatggagaaaggagatttatgcagagaactttgtataccaacaaataccacagtatcatttgaagttgaagag aatgaagctgatgtacgtcccatttcagcgccttgtacaacacatcagattattggagatgggaactgtttctacagggc aatttctttcactgtatcgaattctgaagagcatcacatctttctgcggaagaagttatatgaacacatgcagaataata aagtggcaattctgtctttgctcgatagaggtgttcaaattaatcaatatctcaaccaagtgaaagagattggaacatgg gcaacccaaacagagatttttgctatggcccacatgttaaaaacggatatttacatatacacaaggtctggggatagatg gtcatggatgaaatttagtggacaatttattgattcaaccatgcatgttaatggaaagtctatctacctttatcatagaa atctaaatcactatgatgtagttgtggacatttcaagaggcacagatgaacctattcaaatatctaatggtaacactagg gaatacagagaagataatcttcttcataagtatttttcagaccagaagatgcaacagcaatataaggatgatgtaaaaga caacaaatctgtagtcacaacaatcaaaccagaggatttaaaaagattcaaagatgcagaaaggaaaagattgaaaaggc aagatctcatgtacaggaaaaatgaaaatgaaaggagaaggaaccaaaaagtcgaggaaaatgatagacagagaaaagcc cttaagagaaaaagtgatgaatgtcgagaggaagaaaatagaaggaagagagagtcaaaggtcattcatgatcttgatca gaaaaggaaagaagaaaagagaaaaaatgatgagtttcgagaggaagaaaatagaaggaagagagagtcaaaggtcattc atgatcttgatcagaaaaggaaagaagaaaagagaaaaaatgatgagtttcgggagaaagaaaataggaagaaaagagcg tcaaagatcattcatgatgctgatcagaaaaggaaagaagaaaagagagaatgtgaagaatttcgaaaggaagaaaatag gaagaaaagagactcaaagattcttcatgattttgatcagaaaaggaaagaagaaaagagaaaatgtgaagagttcaggg aggaggaaaataaaaagaagagagaaagtttgtctaatcttctttacaacaaacaaaggaaagaagaaaatagaaaatgt gaagaattcagggaggaggaaaatagaaagaaaagagagtcaaaaatcactcatgatgttgatcagaaaaggaaggaaga aaagaggaaaagtgaagaatttagaaaagaggaaaataaaaagaaaaaagaatcaaaagttgttcatgagaatgaccgaa aaaggaaagaagagaagagaaaaggtgaagaattttgcaatgaagaaaaacagaagagaaaatttgctaaaagcatcaac tcctttcatgcacttgtaacagattttcattctagagttgaagagggaccaatttatacatgtacatgttgcaatcaagg tttttatagagagagtgtacggtatgcatcaacattaaaagtatcacctgatcttaagccaaaagcaataactggagttc taagtaaagatgcaaaggaatggatatgtaaaacttgtggccatcatctttctatgaataaactaccaccatgttcaaag cacaatggtatggtatttcctaggaaagtgcctgaactagaattaacggatacggaagaaaaacttgcatctgtgaggat tccttttatgcagctacatgagctgcctagaggaaaacagattagcttgcatggaaatgtcgttaatgttccatccaata taaaccaaactgttgctaaattacccagaacgtttgatgaaaatttgacaattcctctaaaattaaaacggaagttgtcc tacaaacatcatgtcgattatcagtcagtaagaccagaaaaagttcttgctgctgttaattggctgatacacaatagtga atggtacaagtcagagggtgtaacattggattcatcatggaatcaagacaaattctgtgtggatattgatgaagtagatg aagaaatagaacataaagaggattcatggaatgaagtgccagaggaggatttaccgtgtggaacactggatacactctta cacccacaggatattattatggaggacaggactatcttttcgtttgcacccgcagaaggaaatacaccacttaatatatt ctttgataaaaatgctgaggaattaagtttcccaacaatattttgtggagagcttcgcatagatgacaaatgtagagacg taaaagtctcatatgcagatatctgtaaatcagaattaagaaattcagatagaagggtggcaagtcatataccaaacata tttttcaagtttaagaaacttcagacaaagcatgtcatggacaaggcaaatatatgtctgcgaaaaaccaaaaaaactca aactttaaatgcaggatatttgaaatgtgaggacaatttagataaattatgcagacacgacgatggatttagaatattga aagacttgcgaggctcccctccttattgggaacaagcaaaaaaagacatttttgccctcattagacagctaggaattccc acatggtttgcctcattttccgcagcagaaactcattggaaacatcttctcaaaattcttggaaaaacagtttatgataa aaactattcagatgaagaaattcaacagtttactttcttccaaaaagcagaccttcttagaaaagatccagtaacttgtg cacaacattttgaccaccaagtgaaattgtttattaaccatgtccttaaaagtccaatgaatccaattggaagagtcaca gacttcttttacaaagtcgaatttcagatgaggggttccccccatatacatatggtagcttggattgaagatgctccaaa gcttggagaggacaatcacatagaagtagaggaattcattgataaatatgtttcatgtcacaaagaccagtcgattgaag atctaattcagntaagtttttcaacacctctttga |
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Protein
| Protein ID | pfu_aug2.0_1925.1_18598.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1925.1_18598.t1 MLNFFIDNIFVVFGGKVFQQIVGIPMGTNCAPLLADIFLYSYEAEFIQSPVSKGKRYLASDFNFTYRYIDDVLSINNTKF EDFLSSIYPSELEVKETTETNNSASYLDIMLSYETDGHMNTSLYDTRDDFNFSITTFPFLSSNIHSSPAYGVFISQLNRY ARASTKYTDFVLRARRLSDKLLSKGYACDRLTSSLRKFYGRYQELVIHYDVPLSRMMEKGDLCRELCIPTNTTVSFEVEE NEADVRPISAPCTTHQIIGDGNCFYRAISFTVSNSEEHHIFLRKKLYEHMQNNKVAILSLLDRGVQINQYLNQVKEIGTW ATQTEIFAMAHMLKTDIYIYTRSGDRWSWMKFSGQFIDSTMHVNGKSIYLYHRNLNHYDVVVDISRGTDEPIQISNGNTR EYREDNLLHKYFSDQKMQQQYKDDVKDNKSVVTTIKPEDLKRFKDAERKRLKRQDLMYRKNENERRRNQKVEENDRQRKA LKRKSDECREEENRRKRESKVIHDLDQKRKEEKRKNDEFREEENRRKRESKVIHDLDQKRKEEKRKNDEFREKENRKKRA SKIIHDADQKRKEEKRECEEFRKEENRKKRDSKILHDFDQKRKEEKRKCEEFREEENKKKRESLSNLLYNKQRKEENRKC EEFREEENRKKRESKITHDVDQKRKEEKRKSEEFRKEENKKKKESKVVHENDRKRKEEKRKGEEFCNEEKQKRKFAKSIN SFHALVTDFHSRVEEGPIYTCTCCNQGFYRESVRYASTLKVSPDLKPKAITGVLSKDAKEWICKTCGHHLSMNKLPPCSK HNGMVFPRKVPELELTDTEEKLASVRIPFMQLHELPRGKQISLHGNVVNVPSNINQTVAKLPRTFDENLTIPLKLKRKLS YKHHVDYQSVRPEKVLAAVNWLIHNSEWYKSEGVTLDSSWNQDKFCVDIDEVDEEIEHKEDSWNEVPEEDLPCGTLDTLL HPQDIIMEDRTIFSFAPAEGNTPLNIFFDKNAEELSFPTIFCGELRIDDKCRDVKVSYADICKSELRNSDRRVASHIPNI FFKFKKLQTKHVMDKANICLRKTKKTQTLNAGYLKCEDNLDKLCRHDDGFRILKDLRGSPPYWEQAKKDIFALIRQLGIP TWFASFSAAETHWKHLLKILGKTVYDKNYSDEEIQQFTFFQKADLLRKDPVTCAQHFDHQVKLFINHVLKSPMNPIGRVT DFFYKVEFQMRGSPHIHMVAWIEDAPKLGEDNHIEVEEFIDKYVSCHKDQSIEDLIQXSFSTPL |
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