Gene
| Gene Model ID | pfu_aug2.0_1925.1_18603 |
|---|---|
| Locus | scaffold1925.1 : 90644 ... 93508 : + |
| To GenomeBrowser | scaffold1925.1:90644..93508 |
| Genes list of scaffold | scaffold1925.1 |
| Synonym | pfu_aug1.0_13576.1_10622 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1925.1_18603.t2 | 1 | 1 | RVT_1 | 86 | 245 | 1.4e-16 | 60.5 | 1.3e-20 | 1.9e-16 | 60.0 |
Transcript
| Transcript ID | pfu_aug2.0_1925.1_18603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1925.1_18603.t1 atgggtgcaatgccggaacatctaaaagaaggagtcctaacacctgtactcaagaagggcaaggacaaacgactgccttc aaactacagaggaattacagtgacaccaacagttagtaaaatactagaactctcactgcagggaagacagaacaggctgt tggacctcacccagagcaaattgcagaggggctttactgccaagacttctccactaaatacagcattcatggtcagtgag gccatagctgataaaactgacaacaaagaaaatgttgccctggtaacaatggatgcagaaaaagcctttgatgccatatg gcacgagaggctcttcagcaagatatacctggatggcatacaggggaccttatggctactgctgagagacatgcaagcaa acgctacttccagagttaaatgggagaatacactatccaaccccttcagaacactgcaaggcatcagacagggagccaag ttctcaacaacgttatataaaagatacaacaacaatgtactgcagcaagtagaggacaacaacttgggtacaaacatttg a |
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| Transcript ID | pfu_aug2.0_1925.1_18603.t2 |
| Definition | - |
>pfu_aug2.0_1925.1_18603.t2 atggctattcaagtgctcgtgaacagaatgtcggcgccgtggtcttgtgaaccgataataccaatatcacacgaggaagt aagcacagttatcagaagcctggcaccatatgcctacataattactgcagaacacatacatatagcagaagacgtcctgc taccacatataacaacatgtatcaacaaaatcatagaaatgggtgcaatgccggaacatctaaaagaaggagtcctaaca cctgtactcaagaagggcaaggacaaacgactgccttcaaactacagaggaattacagtgacaccaacagttagtaaaat actagaactctcactgcagggaagacagaacaggctgttggacctcacccagagcaaattgcagaggggctttactgcca agacttctccactaaatacagcattcatggtcagtgaggccatagctgataaaactgacaacaaagaaaatgttgccctg gtaacaatggatgcagaaaaagcctttgatgccatatggcacgagaggctcttcagcaagatatacctggatggcataca ggggaccttatggctactgctgagagacatgcaagcaaacgctacttccagagttaaatgggagaatacactatccaacc ccttcagaacactgcaaggcatcagacagggagccaagttctcaacaacgttatataaaagatacaacaacaatgtactg cagcaagtagaggacaacaacttgggtacaaacatttga |
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Protein
| Protein ID | pfu_aug2.0_1925.1_18603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1925.1_18603.t1 MGAMPEHLKEGVLTPVLKKGKDKRLPSNYRGITVTPTVSKILELSLQGRQNRLLDLTQSKLQRGFTAKTSPLNTAFMVSE AIADKTDNKENVALVTMDAEKAFDAIWHERLFSKIYLDGIQGTLWLLLRDMQANATSRVKWENTLSNPFRTLQGIRQGAK FSTTLYKRYNNNVLQQVEDNNLGTNI |
|
| Protein ID | pfu_aug2.0_1925.1_18603.t2 |
| Definition | - |
>pfu_aug2.0_1925.1_18603.t2 MAIQVLVNRMSAPWSCEPIIPISHEEVSTVIRSLAPYAYIITAEHIHIAEDVLLPHITTCINKIIEMGAMPEHLKEGVLT PVLKKGKDKRLPSNYRGITVTPTVSKILELSLQGRQNRLLDLTQSKLQRGFTAKTSPLNTAFMVSEAIADKTDNKENVAL VTMDAEKAFDAIWHERLFSKIYLDGIQGTLWLLLRDMQANATSRVKWENTLSNPFRTLQGIRQGAKFSTTLYKRYNNNVL QQVEDNNLGTNI |
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