Gene
| Gene Model ID | pfu_aug2.0_193.1_10409 |
|---|---|
| Locus | scaffold193.1 : 72013 ... 89185 : - |
| To GenomeBrowser | scaffold193.1:72013..89185 |
| Genes list of scaffold | scaffold193.1 |
| Synonym | pfu_aug1.0_12330.1_61027 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cytochrome p450 4v2-like | GO:0005488 GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_193.1_10409.t1 | 2 | 1 | p450 | 28 | 279 | 0.0 | 315.0 | 8.60005e-41 | 1.3e-36 | 126.1 |
| pfu_aug2.0_193.1_10409.t1 | 2 | 2 | p450 | 323 | 477 | 0.0 | 315.0 | 0.0 | 0.0 | 188.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_193.1_10409.t1 | gi|586451180|ref|XP_006834517.1| | PREDICTED: cytochrome P450 4V2-like [Chrysochloris asiatica] | 0.0 |
| pfu_aug2.0_193.1_10409.t1 | gi|585646050|ref|XP_006882324.1| | PREDICTED: cytochrome P450 4V2-like [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_193.1_10409.t1 | gi|742091919|ref|XP_010896517.1| | PREDICTED: cytochrome P450 4V2 isoform X1 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_193.1_10409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10409.t1 atgtctaatcgatcacagcggatcgcattctcaacagaattctacaacaccctgatagagtattcagagaggtggcatga acatggagtattcaggctttgggttggaacacaacttcttgttggcttctataaagctgaaacggtcgaggttgtcctac aaagcagtaagattttggacaaggcaacagaatatagatttcttcatccttggttaggaacaggtctcctcaccagcaca ggatcaaaatggcatagcaggcgtaagctgcttactccatcttttcacttcaagattctgaatgattttgttggtgtgtt ccaagatcaagctcagaccatggttaaaagactcgatagcgtggcggacagaggaacatttaacatatttagctacataa cattatgtgctctggatataatttgtgaaactgcaatgggtaagacagtcgatgctcaaggaaacactgattcagaatat gtcaaatgtgtttataagatagcagaattaattctaaagagacagaggacgccatggtatggtcctgatttcttgtataa tacgataggtgacggcaaggaacacgcacattgtctaaaagttttacatgagttcacagaaaaggtgatacaagaaaaaa cggaagagttttcaaagaaacaggaaagcggtatgacaatggaaaatgttctatctagccatgatagtaatgaagatgct tatatgtcaagaaagaaccgtctagccttcctggatatgttactgtatgctaaacaggacgggaaacctatgtcatctcc tgatatcagagaggaagtggacacattcatgtttgaggactccatgatgggccctgtccaaacctttttagaaaagccac ggccccaaccacttgtcctctctgaatgtcagtcggactcctcgagtgaaaacaaacatgagctcgctaaagccggcaga gcacggactgtactacgtaattctgacagaccgttaacgatgaaagatctacaggaaatgaaatatctagagtgttgtat caaggaggctctccggattttcccgccagttccatttttcggtagatcccttacagaagactgtaaaattggaaaatata ctgtaccaaaaggatctacagtggtaatatcgccagcttcattgcataaagacccgagatattttccggatcctgaaaaa ttcgaccccgaccgctttcttcctgaaaactctaggaaaagacatccctatgcatatgtaccattttcagcaggtcccag aaactgcataggtcaaaagtttgccttgttggaggagaaagccgtgatatcgaccattttaaggaagttcaccgttatat ccaaacaaaagagggaggagttgtgtcccattggtgaacttatactacgaccagagaatggaatcttagtagaactgcat tctaggataaagtga |
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Protein
| Protein ID | pfu_aug2.0_193.1_10409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10409.t1 MSNRSQRIAFSTEFYNTLIEYSERWHEHGVFRLWVGTQLLVGFYKAETVEVVLQSSKILDKATEYRFLHPWLGTGLLTST GSKWHSRRKLLTPSFHFKILNDFVGVFQDQAQTMVKRLDSVADRGTFNIFSYITLCALDIICETAMGKTVDAQGNTDSEY VKCVYKIAELILKRQRTPWYGPDFLYNTIGDGKEHAHCLKVLHEFTEKVIQEKTEEFSKKQESGMTMENVLSSHDSNEDA YMSRKNRLAFLDMLLYAKQDGKPMSSPDIREEVDTFMFEDSMMGPVQTFLEKPRPQPLVLSECQSDSSSENKHELAKAGR ARTVLRNSDRPLTMKDLQEMKYLECCIKEALRIFPPVPFFGRSLTEDCKIGKYTVPKGSTVVISPASLHKDPRYFPDPEK FDPDRFLPENSRKRHPYAYVPFSAGPRNCIGQKFALLEEKAVISTILRKFTVISKQKREELCPIGELILRPENGILVELH SRIK |
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