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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_193.1_10410
Locus scaffold193.1 : 142736 ... 144015 : +
To GenomeBrowser scaffold193.1:142736..144015
Genes list of scaffold scaffold193.1
Synonym pfu_aug1.0_72480.1_41943

Manual annotation
Annotation by Blast2GO
Annotation GO
prolactin-releasing peptide receptor GO:0004983 GO:0007218 GO:0016021

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_193.1_10410.t1 1 1 7tm_1 2 53 6.8e-07 28.6 6.3e-11 9.4e-07 28.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_193.1_10410.t1 gi|524911910|ref|XP_005110813.1| PREDICTED: bombesin receptor subtype-3-like [Aplysia californica] 3.0e-35
pfu_aug2.0_193.1_10410.t1 gi|676452301|ref|XP_009052988.1| hypothetical protein LOTGIDRAFT_174874 [Lottia gigantea] 2.0e-33
pfu_aug2.0_193.1_10410.t1 gi|755952234|ref|XP_011302024.1| PREDICTED: prolactin-releasing peptide receptor [Fopius arisanus] 1.0e-20
pfu_aug2.0_193.1_10410.t1 gi|645001591|ref|XP_008209596.1| PREDICTED: prolactin-releasing peptide receptor [Nasonia vitripennis] 8.0e-18
pfu_aug2.0_193.1_10410.t1 gi|665790597|ref|XP_008560991.1| PREDICTED: uncharacterized protein LOC103580861 isoform X2 [Microplitis demolitor] 9.0e-17

Transcript
Transcript IDpfu_aug2.0_193.1_10410.t1
Definition-
>pfu_aug2.0_193.1_10410.t1
atggtcaccttatttgcaatttgctggtgcccaatgaacattcttattctagttcagtatgtggttcacgaaaatggcga
caacaccggacattttgacatcacatacataacattcacattatttggtttcctttctacctgtgtgaaccctgtactgt
ttgcctcgtggaggatgtcggagacaacaaaggatcgattaaggggatatttccgcttcaacatcaaaagggtccaccat
aaaagaaaaccaaactctttcaaagaagaagcaaacggcaatagaagccgtcgaaaggaggaatatatccgagacgaaat
gcatcggttgccttcctga

Protein
Protein IDpfu_aug2.0_193.1_10410.t1
Definition-
>pfu_aug2.0_193.1_10410.t1
MVTLFAICWCPMNILILVQYVVHENGDNTGHFDITYITFTLFGFLSTCVNPVLFASWRMSETTKDRLRGYFRFNIKRVHH
KRKPNSFKEEANGNRSRRKEEYIRDEMHRLPS

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