Gene
| Gene Model ID | pfu_aug2.0_193.1_10413 |
|---|---|
| Locus | scaffold193.1 : 169574 ... 182181 : - |
| To GenomeBrowser | scaffold193.1:169574..182181 |
| Genes list of scaffold | scaffold193.1 |
| Synonym | pfu_aug1.0_3864.1_08751 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_193.1_10413.t1 | 4 | 1 | HABP4_PAI-RBP1 | 35 | 84 | 1.8e-27 | 95.8 | 0.077 | 570.0 | 1.0 |
| pfu_aug2.0_193.1_10413.t1 | 4 | 2 | HABP4_PAI-RBP1 | 142 | 159 | 1.8e-27 | 95.8 | 2.0 | 15000.0 | -6.6 |
| pfu_aug2.0_193.1_10413.t1 | 4 | 3 | HABP4_PAI-RBP1 | 163 | 272 | 1.8e-27 | 95.8 | 2.5e-31 | 1.8e-27 | 95.8 |
| pfu_aug2.0_193.1_10413.t1 | 4 | 4 | HABP4_PAI-RBP1 | 271 | 307 | 1.8e-27 | 95.8 | 1.0 | 7400.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_193.1_10413.t1 | gi|524884828|ref|XP_005099030.1| | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like isoform X1 [Aplysia californica] | 1.0e-31 |
| pfu_aug2.0_193.1_10413.t1 | gi|383856042|ref|XP_003703519.1| | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Megachile rotundata] | 3.0e-30 |
| pfu_aug2.0_193.1_10413.t1 | gi|328778152|ref|XP_392925.3| | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like isoform X2 [Apis mellifera] | 1.0e-28 |
| pfu_aug2.0_193.1_10413.t1 | gi|676476971|ref|XP_009060968.1| | hypothetical protein LOTGIDRAFT_234584 [Lottia gigantea] | 2.0e-28 |
| pfu_aug2.0_193.1_10413.t1 | gi|572258716|ref|XP_006607730.1| | PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like isoform X1 [Apis dorsata] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_193.1_10413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10413.t1 atggacgcacaatacggcatagcagttactaataaatttcagctcttcattgacgaagatgctgacccgttcgatatcct cagtcagcaggaggagcagaagaagaaggaacccaaagagaaggagaagggtaaaggcaaaaacaaacagggcaagagca aaaatgttctgcagtcagacaccaagaataagcctgttgaacagactatccaaaagaaagaagagaagcccagtaaccag gctccaccaaggcaagataggcctccaaggagtgcccgtatgaacaaagagttcaaagatcgcgaggaaggtgacaggag gcctaggagaagggatgaaaatgtacccccagagttcagggaaaagtcagaccgtgatgttggacagtcaggattcaaca gaccagaaagtggtagagggtttggcagaggtcgtggccggggaggtcgtggaggaagaggtagaggtggattcggagac cgtccaggaaaacgagattttgaaaggcacagtggcagtgaccgaaccagtggtgtaaaaccaacggacaaaagagacgg aggtggatcgcacaactggggcacatataaggatgatttgcagggtgaagatgtcaaagaaccagttgaaacagaagcaa aagaatggaatgctgaagatactgaaaatcaggatccaaaccaaagtacagaatccacggaagctcaggctccggctgat gatactcctcatgaaatgaccctcgacgagtggaaggctcaacaagaaaagaaacgattaaagtcccaatttaatatccg taaacctggagaaggagacggaaaatggcaagctggaacggtttacaggaaaaagaatacaaattctgatgaagaggagg aggaagatgaagaagaggaggaggaagaggatgaagagatggctaagaacaagaatcttgtgaacagcctgaggtttgtc ttcaacgattcaccgcgacgtggtcgtggaggcaggcgggtgagaggtacgcggggaggaagaggtgggggccgcgggga caggagaggaggaggacgcgaaatggctcctaaatttgatgatgaaaatgactttcccagtcttgtgaagactgaggcct ga |
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Protein
| Protein ID | pfu_aug2.0_193.1_10413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10413.t1 MDAQYGIAVTNKFQLFIDEDADPFDILSQQEEQKKKEPKEKEKGKGKNKQGKSKNVLQSDTKNKPVEQTIQKKEEKPSNQ APPRQDRPPRSARMNKEFKDREEGDRRPRRRDENVPPEFREKSDRDVGQSGFNRPESGRGFGRGRGRGGRGGRGRGGFGD RPGKRDFERHSGSDRTSGVKPTDKRDGGGSHNWGTYKDDLQGEDVKEPVETEAKEWNAEDTENQDPNQSTESTEAQAPAD DTPHEMTLDEWKAQQEKKRLKSQFNIRKPGEGDGKWQAGTVYRKKNTNSDEEEEEDEEEEEEEDEEMAKNKNLVNSLRFV FNDSPRRGRGGRRVRGTRGGRGGGRGDRRGGGREMAPKFDDENDFPSLVKTEA |
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