Gene
| Gene Model ID | pfu_aug2.0_193.1_10414 |
|---|---|
| Locus | scaffold193.1 : 182472 ... 192231 : + |
| To GenomeBrowser | scaffold193.1:182472..192231 |
| Genes list of scaffold | scaffold193.1 |
| Synonym | pfu_aug1.0_3864.1_08749 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_193.1_10414.t1 | 4 | 1 | zf-H2C2_2 | 57 | 65 | 1.4e-15 | 56.6 | 0.07 | 150.0 | 2.9 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 1 | zf-C2H2 | 57 | 78 | 1.1e-08 | 34.8 | 8.4e-09 | 1.8e-05 | 24.8 |
| pfu_aug2.0_193.1_10414.t1 | 2 | 1 | zf-met | 57 | 77 | 1.6e-06 | 28.1 | 1.9e-08 | 4.1e-05 | 23.6 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 1 | zf-C2H2_4 | 57 | 78 | 4.9e-06 | 26.5 | 3.3e-08 | 7.1e-05 | 22.8 |
| pfu_aug2.0_193.1_10414.t1 | 4 | 2 | zf-H2C2_2 | 70 | 95 | 1.4e-15 | 56.6 | 1.7e-11 | 3.5e-08 | 33.3 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 2 | zf-C2H2 | 84 | 108 | 1.1e-08 | 34.8 | 7.3e-07 | 0.0015 | 18.7 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 2 | zf-C2H2_4 | 84 | 108 | 4.9e-06 | 26.5 | 0.00028 | 0.59 | 10.5 |
| pfu_aug2.0_193.1_10414.t1 | 2 | 2 | zf-met | 91 | 106 | 1.6e-06 | 28.1 | 0.035 | 75.0 | 3.7 |
| pfu_aug2.0_193.1_10414.t1 | 4 | 3 | zf-H2C2_2 | 101 | 127 | 1.4e-15 | 56.6 | 9.4e-09 | 2.0e-05 | 24.6 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 3 | zf-C2H2 | 114 | 127 | 1.1e-08 | 34.8 | 0.87 | 1800.0 | -0.5 |
| pfu_aug2.0_193.1_10414.t1 | 3 | 3 | zf-C2H2_4 | 116 | 133 | 4.9e-06 | 26.5 | 0.13 | 280.0 | 2.2 |
| pfu_aug2.0_193.1_10414.t1 | 4 | 4 | zf-H2C2_2 | 129 | 135 | 1.4e-15 | 56.6 | 2.5 | 5300.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_193.1_10414.t1 | gi|564256095|ref|XP_006267016.1| | PREDICTED: zinc finger protein 367 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_193.1_10414.t1 | gi|524884824|ref|XP_005099028.1| | PREDICTED: Krueppel homologous protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_193.1_10414.t1 | gi|733928062|ref|XP_010724937.1| | PREDICTED: zinc finger protein 367 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_193.1_10414.t1 | gi|701308999|ref|XP_010015406.1| | PREDICTED: zinc finger protein 367 [Nestor notabilis] | 0.0 |
| pfu_aug2.0_193.1_10414.t1 | gi|363744478|ref|XP_003643057.1| | PREDICTED: zinc finger protein 367-like isoform X1 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_193.1_10414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10414.t1 atgccgtatactagcccatctccaacatctttcggaaggggttccccggagggtgattcaggtgacggtgatagtgaata cgaagatcccaacttgagaagaggaaggccacgggcggacgtcgtgaactcgctaatcttcaaaggcacaatgtcgggta gcagtattcgttgtgaagtgtgtaatcgagtgttccccagagaaaagtcacttcaagcgcacatgcggacgcacaccggg gaacgaccgtacaattgtgactatcctggatgtgataaagcattctgtcagagtggacagttaaagactcaccagcgcct ccatacgggagagaaacctttcatgtgctcagaacaaggttgcccaagtcgttttacacatgccaatcgtcattgcgcgg aacatccctatgctacactggttcgaatcaaactggatggatcccttcaagacctgatggcactcagagaccaggaaact aataatgctgtcagggaatggctagacttacaaatcgcagtacgacaagaaagatgtgggagagggggaagatccaaaaa gaaacgtctattcagtgaagatacagactctcaaagctcatccccagacagtaagatgcaaatgattacgaacaacaatg agtacaaggtacctgaacaaaccgagccgatgacaaacggtcacattccgtccatgacacatgaacaaatgtatcaacca cagatcaaaaccgaaattaaatatgaaccagctatagacaacaatcagtactttccacaggtcagtgaatataaaacgcc tatgtactacaatgactacaatcagtatcctatgtacaatatgcaacctgtacagaatgactatcaagacatgcatcatc aacatcattacgttccgcaggaagattataaaattcacaaagacccattctataatgtgcaacctgtggagatgtacaat aacatggaacccgcaaatgtagaatactcaatcaccgaactccaacccgcaaccgccccgattaaaacggagaaacagga aggggaaatgacgctcagtcaaaatgctgacaagtggatttctgccttggcattggtggaattatcacatggggaactat ga |
|
Protein
| Protein ID | pfu_aug2.0_193.1_10414.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_193.1_10414.t1 MPYTSPSPTSFGRGSPEGDSGDGDSEYEDPNLRRGRPRADVVNSLIFKGTMSGSSIRCEVCNRVFPREKSLQAHMRTHTG ERPYNCDYPGCDKAFCQSGQLKTHQRLHTGEKPFMCSEQGCPSRFTHANRHCAEHPYATLVRIKLDGSLQDLMALRDQET NNAVREWLDLQIAVRQERCGRGGRSKKKRLFSEDTDSQSSSPDSKMQMITNNNEYKVPEQTEPMTNGHIPSMTHEQMYQP QIKTEIKYEPAIDNNQYFPQVSEYKTPMYYNDYNQYPMYNMQPVQNDYQDMHHQHHYVPQEDYKIHKDPFYNVQPVEMYN NMEPANVEYSITELQPATAPIKTEKQEGEMTLSQNADKWISALALVELSHGEL |
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