Gene
| Gene Model ID | pfu_aug2.0_194.1_13762 |
|---|---|
| Locus | scaffold194.1 : 48673 ... 58255 : - |
| To GenomeBrowser | scaffold194.1:48673..58255 |
| Genes list of scaffold | scaffold194.1 |
| Synonym | pfu_aug1.0_14887.1_32490 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| clp1 protein | GO:0005488 GO:0005615 GO:0006032 GO:0008843 GO:0050896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_194.1_13762.t1 | 1 | 1 | Glyco_hydro_18 | 24 | 358 | 0.0 | 266.3 | 0.0 | 0.0 | 265.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_194.1_13762.t1 | gi|92110436|emb|CAI96028.1| | 0.0 | |
| pfu_aug2.0_194.1_13762.t1 | gi|92110426|emb|CAI96023.1| | 0.0 | |
| pfu_aug2.0_194.1_13762.t1 | gi|676485135|ref|XP_009063563.1| | hypothetical protein LOTGIDRAFT_195779 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_194.1_13762.t1 | gi|544399534|ref|XP_005540544.1| | PREDICTED: chitotriosidase-1 isoform X4 [Macaca fascicularis] | 0.0 |
| pfu_aug2.0_194.1_13762.t1 | gi|635131389|ref|XP_007987078.1| | PREDICTED: chitotriosidase-1 [Chlorocebus sabaeus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_194.1_13762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13762.t1 atggatttttacactagtatactaccctttttgatatcgatacttttggaattatgcagtggatttaatagattttgtta ctacaatggttgggctttatacagggacaatgaccatgccttgctcccagagaaaatcgacgccttcctctgtacacatc ttgtatttgccttcggagccatagacgaatcgggcaccaggatatatgtccccgaggtgtttgaggacatgcatttattc gaaagaatgaatgagcttagacaccgtaacgaagacctgaatttagttctatctgttggtgggtgggacatgggaagtga agcttggagtgaagtcttagcatccaaagacaacatgcagacatttgttaaagaagccattgtgtatctgaggctacatg actttgatgggatagaccttgactgggagtatcctaccttccgaggaagcaaacccattgatagggagagattttcacaa ctgatagagatattccgccatgaaatggatatagaagagacccctgatgacaaatgggacttgtgtctgtctgtagctgt agatccatcagaatacatgagctcaagttcctacgaaattgacaaaattacaagaaatatagatttttacaacctgaaaa tgtacgattttcacggtcattggaacgatccggtacttgtgaaacatcactcagctctgacgtcatcaagtagcttacca agtgtaaatgagctagcgaagatgtgggtgcagagaggtgttcctaaaagaaaaatcaacatcggtattccctttttcgg acgatcttacagaacagctcagccaaatgccaccatcggtgatccggcgcttggtcctggatcggatgggggaattggta taccggtctctaatatctgtcatctggttcgaggtggaacaaaagaatattatttgaaagaagaaaatgttccatttatt gtgaatggcgatgagtgggttggctttgataatcctcgaagtgtaagagaaaaggctgccctggtgaagaataacagact aggtggagtcatggtttgggcaatagacatggacgaccattcaggatggtgtggagagaagttccccctaatgatgtcga tcatccacggcctcggggaatttgtagattacatgtccgatacactagaggcagaaagggaaatgatcaacaagaaaata cggaaagctgcacgtgaaatctcctattattcagataaagggaacttcacaatggcaaagagaatggaggataagttgaa tcatttgaaggatcatctatctacagttcaggcccatcagtcagtccaatgggcaaacgttcaatatagtgcaggccttg gaggtaaaccgttaccaagtaaagacactccatcctggtcatggtag |
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Protein
| Protein ID | pfu_aug2.0_194.1_13762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13762.t1 MDFYTSILPFLISILLELCSGFNRFCYYNGWALYRDNDHALLPEKIDAFLCTHLVFAFGAIDESGTRIYVPEVFEDMHLF ERMNELRHRNEDLNLVLSVGGWDMGSEAWSEVLASKDNMQTFVKEAIVYLRLHDFDGIDLDWEYPTFRGSKPIDRERFSQ LIEIFRHEMDIEETPDDKWDLCLSVAVDPSEYMSSSSYEIDKITRNIDFYNLKMYDFHGHWNDPVLVKHHSALTSSSSLP SVNELAKMWVQRGVPKRKINIGIPFFGRSYRTAQPNATIGDPALGPGSDGGIGIPVSNICHLVRGGTKEYYLKEENVPFI VNGDEWVGFDNPRSVREKAALVKNNRLGGVMVWAIDMDDHSGWCGEKFPLMMSIIHGLGEFVDYMSDTLEAEREMINKKI RKAAREISYYSDKGNFTMAKRMEDKLNHLKDHLSTVQAHQSVQWANVQYSAGLGGKPLPSKDTPSWSW |
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