Gene
| Gene Model ID | pfu_aug2.0_194.1_13763 |
|---|---|
| Locus | scaffold194.1 : 63728 ... 80535 : - |
| To GenomeBrowser | scaffold194.1:63728..80535 |
| Genes list of scaffold | scaffold194.1 |
| Synonym | pfu_aug1.0_10761.1_31980 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chitinase-3-like protein 2 | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_194.1_13763.t1 | 1 | 1 | CBM_14 | 64 | 104 | 2.3e-07 | 30.6 | 6.2e-11 | 4.6e-07 | 29.6 |
| pfu_aug2.0_194.1_13763.t1 | 1 | 1 | Glyco_hydro_18 | 112 | 447 | 0.0 | 241.0 | 0.0 | 0.0 | 240.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_194.1_13763.t1 | gi|655847477|ref|XP_008262904.1| | PREDICTED: chitinase-3-like protein 2 [Oryctolagus cuniculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_194.1_13763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13763.t1 atgcttttatcgtggttagaatttgtactgatttgtcttattggtcaaggcattcacgccagccataaaggagtccctag tgtgagcggatcagcactttcgttcgggacgtatagtatcggatttggtggtggtatcactcaactggaaaagaaataca acatagaaaatgtgtttccattgatattttgttacggcaaagtaccggggatttacgggaacaaatatgactgctcgcgg tattacatttgcgacgaatctcggagtatgagcatgccgtgtccgccaaggacattctacgacgagaacagacataaatg acaaaagttcaataggttttgccactacaacagctggtccttatccagaaatccagaacatggccttatcccagaggata tcgatccgtttctatgtacccacattattctcgggttcgccgaaatcgacgaaacggggcttcgactaaaagatcccaac cattaccaacaagaatatctttatcaacgaatagtgcgattacgaagaataaatcccagactgaacatgattttatcagt tggtggatgggacaaatcgcaagaagggtattctaaacttgtatcatccagagaaaatattcttttcttcacaaaatgga tcattacgtatcttcgacgtcacgacttcgacggcctcgatttggattgggagtacccgacattcaaaggcagtccgatg gctgatagaaagaaatttgttgatcttgttgagaacttggcttacgaatttgacatcgaagaaattccggacatcaagtg gaaactgaccctgacgtggacggcagacccgcttgagccaataagaacttctgcgtatgacattaaaggaatagcaagca aggtgcactttgtcaacttgaagatgtacgatttccatggacattgggacgatccactacaagtcaaccaccacagtcct ctgaccaacccaagcagtcccagaaatgttaatgaattagccaaaacatgggtgaaagcaggtgttcgaattgagaagtt gatacttggaattcctttcttcggtagatcgtttacactgaaaacagctaatatgtctatgccaggatcaccagccgtag gaccaggatccgactatggcgacgggatccctattcacaatttatgtcacataattcgaggaggaacaaaggaactttac cttccagagaagaaagtaccatacatagtcagcggcagtgaatggatcgggtatgataatccacggagtgttatggaaaa ggctcagctagtcttcaacaatgccttggccggagtgatgatatattctttagacatggatgaccacagaggtacatgtg gtcagaaataccccatgatgatggcggtcatccatggactgaatgcctacatggagtacattgactctaaacacaagtcc ctggaactcacctacaacaagaagatcctccgtgcgagggtttccttgcgaaattaccgacgaaggaatcagccagacaa agttgcagaggtgcagcagaggattcgccaaattgagcaggagcaacagcaagcaatggggaacatggtgtacgaaagac aacaagcacaagctatgttaaatagaggggtgtcgctccctccgatagaacaacagtcgtggtcatggtag |
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Protein
| Protein ID | pfu_aug2.0_194.1_13763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13763.t1 MLLSWLEFVLICLIGQGIHASHKGVPSVSGSALSFGTYSIGFGGGITQLEKKYNIENVFPLIFCYGKVPGIYGNKYDCSR YYICDESRSMSMPCPPRTFYDENRHKXQKFNRFCHYNSWSLSRNPEHGLIPEDIDPFLCTHIILGFAEIDETGLRLKDPN HYQQEYLYQRIVRLRRINPRLNMILSVGGWDKSQEGYSKLVSSRENILFFTKWIITYLRRHDFDGLDLDWEYPTFKGSPM ADRKKFVDLVENLAYEFDIEEIPDIKWKLTLTWTADPLEPIRTSAYDIKGIASKVHFVNLKMYDFHGHWDDPLQVNHHSP LTNPSSPRNVNELAKTWVKAGVRIEKLILGIPFFGRSFTLKTANMSMPGSPAVGPGSDYGDGIPIHNLCHIIRGGTKELY LPEKKVPYIVSGSEWIGYDNPRSVMEKAQLVFNNALAGVMIYSLDMDDHRGTCGQKYPMMMAVIHGLNAYMEYIDSKHKS LELTYNKKILRARVSLRNYRRRNQPDKVAEVQQRIRQIEQEQQQAMGNMVYERQQAQAMLNRGVSLPPIEQQSWSW |
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