Gene
| Gene Model ID | pfu_aug2.0_194.1_13765 |
|---|---|
| Locus | scaffold194.1 : 148936 ... 153520 : + |
| To GenomeBrowser | scaffold194.1:148936..153520 |
| Genes list of scaffold | scaffold194.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trophinin isoform x1 | GO:0005634 GO:0005737 GO:0030308 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_194.1_13765.t1 | 3 | 1 | OEP | 11 | 45 | 5.2e-07 | 29.4 | 0.00033 | 0.11 | 12.0 |
| pfu_aug2.0_194.1_13765.t1 | 1 | 1 | Tropomyosin | 17 | 162 | 1.0e-06 | 28.0 | 7.5e-09 | 2.5e-06 | 26.7 |
| pfu_aug2.0_194.1_13765.t1 | 3 | 2 | OEP | 49 | 123 | 5.2e-07 | 29.4 | 1.5e-05 | 0.0052 | 16.3 |
| pfu_aug2.0_194.1_13765.t1 | 3 | 3 | OEP | 130 | 163 | 5.2e-07 | 29.4 | 0.0058 | 1.9 | 8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_194.1_13765.t1 | gi|170046850|ref|XP_001850960.1| | salivary gland secretion protein 4 [Culex quinquefasciatus] | 1.0e-27 |
| pfu_aug2.0_194.1_13765.t1 | gi|68060874|ref|XP_672429.1| | hypothetical protein [Plasmodium berghei strain ANKA], partial [Plasmodium berghei ANKA] | 4.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_194.1_13765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13765.t1 atgtcatcagcggtatacacaagacaagaaaaagagtaccagcaggtggacacggccaacaaacaggtggagacggccaa caaacaggtggagacggctgacaaacaggtggagacggcaaacaaacaggcggagacgactgacaaacaggtggagacgg cctacaaaaaggtggagacgacagacaaacaggtggagacgacagacaaagaggtagagacggcagaaaagagagtacca gcaggtgaacacggcagacaaacgatggagacgggcaacaaacaggtggagacggccaacaatcaggtggagacggcaaa caaacagatagagacggctgacaatcaggtggagacggcagacaaacaggcgaagacggctgacaaacagatggagacgg cctacaaaaaggtggagacgacagacaaacaggtggagacgacagacaaagaggtagagacggccaacaaagaggtgcag atggccgacatagaggtggagacggcctacaaacaatag |
|
Protein
| Protein ID | pfu_aug2.0_194.1_13765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13765.t1 MSSAVYTRQEKEYQQVDTANKQVETANKQVETADKQVETANKQAETTDKQVETAYKKVETTDKQVETTDKEVETAEKRVP AGEHGRQTMETGNKQVETANNQVETANKQIETADNQVETADKQAKTADKQMETAYKKVETTDKQVETTDKEVETANKEVQ MADIEVETAYKQ |
|