Gene
| Gene Model ID | pfu_aug2.0_194.1_13766 |
|---|---|
| Locus | scaffold194.1 : 155765 ... 178417 : + |
| To GenomeBrowser | scaffold194.1:155765..178417 |
| Genes list of scaffold | scaffold194.1 |
| Synonym | pfu_aug1.0_23304.1_26077 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable chitinase 3-like | GO:0016798 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_194.1_13766.t1 | 3 | 1 | Glyco_hydro_18 | 23 | 362 | 0.0 | 717.9 | 0.0 | 0.0 | 361.9 |
| pfu_aug2.0_194.1_13766.t1 | 3 | 2 | Glyco_hydro_18 | 410 | 758 | 0.0 | 717.9 | 0.0 | 0.0 | 367.2 |
| pfu_aug2.0_194.1_13766.t1 | 3 | 3 | Glyco_hydro_18 | 805 | 833 | 0.0 | 717.9 | 0.83 | 6200.0 | -3.7 |
| pfu_aug2.0_194.1_13766.t1 | 1 | 1 | CBM_14 | 853 | 904 | 1.2e-12 | 47.5 | 2.9e-16 | 2.1e-12 | 46.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_194.1_13766.t1 | gi|634826085|ref|XP_007948616.1| | PREDICTED: chitinase-3-like protein 2 [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_194.1_13766.t1 | gi|340721438|ref|XP_003399127.1| | PREDICTED: probable chitinase 3 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_194.1_13766.t1 | gi|751207623|ref|XP_011156382.1| | PREDICTED: probable chitinase 3 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_194.1_13766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13766.t1 atggtagggaagctaactccagttcttttggccttggttgctgtaagtgtgattagtgctgctagctaccgacgggtatg ctaccatacaaactggtcacagtacaggactggaccggccaaattctatcctgagaacatagaccctcgtctttgtactc atgtcatctatgccttcgctaagctcaccaataacaagctgacaccgtttgaatggaacgacgaaagcacaccatggatg aaggggatgtatgagaggttcaataagttgaaacaacagaatcccgctttgaaaacttcccttgctgttggtggatggaa tatgggttccgccccatttactcagatggttgctacagacgctacaagacgtgcctttgcaacagacgcagtaaaattcc tcaggaaacacaactttgatggccttgaccttgactgggaatatcccggaaatcgtggtagccctgccagtgacaaagat aaatatacagaacttgtaaaggtgttgaactccgaattgaagaaggaggctcagactagtggaaaagatcaactaattct cagtgcagccattccagcaggcaaatcaaatattgaccctggatacaacgttccagaaatatcaaaatacgtggacatgt tgaatttgatgacatatgacttacacggaggatcttgggaagacgtgaccggtcataatgcccctctacatcaatctcca aaggacaagggaaataacaccatgctcaacgtggaatgggctgctaaatactgggtcagtaagggagcaccaaaagcaaa gctaaacattggtatgcctttgtatggtcgatcttttactcttgctagccctagcaacaatggtctttatgccccagaca gaggaaatggcggacaagctggaaaatacaccagggagtctggatttcttgcttattacgagatttgtgagatgttgaag acaggaggtacccgccattacttacccgacgccatggtgccttatcttgtaaaaggggatcaatgggtgggatacgacga tcccgacagtctgaagaaaaaggtggattttgtaaagcaagaaggacccgtagcgcagacgaccaagggtgcagctccaa caaataagcagacgacacctggatctggatcaggtccacttgtccaaagcacaacatcagcaccgtcacctgcttgtgta aatactggtggtggaaacagcagcggtaaaagaagcgtttgttactacgctaactgggcgcaatacaggagcgctccagc caaattcctgcccgagaacattgaccctacgctttgtacccatgtcatgtactccttcgctaaactggtcaacaaccacc ttgcaccatttgaaacaaacgacgaaagtaaaggaggcaccaagggcatgtacgaaagagtccttgatatgaaaaagcaa aatccatctctgaaagtgtccctggctgtgggtggatggaacatgggatctgcacccttctcacgtatggtgtctacgga cgctaccaggcgtgactttgccaccaacgcagtcaagttcctacgggatcatggatttgatggtttggacattgactggg agtaccctgccaaccgcggaagtcctgcaggcgataaagcaaaattcgttgaacttatgaaggtcctcgatgccgaattc aaaaaggaagctcagtcatcagggaaagataaactactattgagtcttgcggttcccacaggaaagagcaatatcgactc tgggtatgatgtaccccaggcatccaaatatgtagatatgtttaatctgatggcatacgacttgcatggtgcatcatggg aaagttttactggacacaatgcccctctgtatcagtctgcaggagacagcggtaatatcaatgtggcatgggctgctaac tactgggcacaaaagggagcgccaaaatctaagataaacattggtatgcccttgtatggtcgtacttataatctggcaaa tcctggtaataatggtgtacacgcaccagacagtggtggtggtggacccgctggccagtacaccaaggaagcaggaacat tggcttattttgagttatgcaaaatggtgaaaaatgttgccactcgtcatttcgacaatcaagctaaggtaccttacttg gtgagcggaaatgagtggatctcttatgatgatgcagagagcttgaaagctaaggtagattttatcaacaagcaaggctt tggtggtgcaatggtttggtcactcgacttggacgatttcaccggaagtgtatgtggtgaagggaaatatccattacttc gtgcaattaattccggacttggtaatacaggtgcaggatcaggcagtggcactggatgtgttacacaggctacccaaaaa cctaccagtggatctagtacgaccgcaaagactacatcagctggacagcagacgacaaaatccacacccgcctcatggac tacagcaaaacctcaggtcaccactacccagccacagtcaaccacacatcacataggactcacccagagattcaactgta atggaaaagctagcggattttatgctgatccaagttcatgcgaatcttacttcatctgtgctggtagccaaagcttcgaa gtcatgtgtgcgaagggactcaaattcaatcccaagacaaaatactgtgactggtcaaatcaagtaaaatgcggcagtga ctcttctactacctcacaatcccaatcccaaactacgacactgaagcagacgacacctcctgcacctggaatgtcaacca aatcaacacctcaatcctccacaactaccacctcaacgaccaccacgaccactacntag |
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Protein
| Protein ID | pfu_aug2.0_194.1_13766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13766.t1 MVGKLTPVLLALVAVSVISAASYRRVCYHTNWSQYRTGPAKFYPENIDPRLCTHVIYAFAKLTNNKLTPFEWNDESTPWM KGMYERFNKLKQQNPALKTSLAVGGWNMGSAPFTQMVATDATRRAFATDAVKFLRKHNFDGLDLDWEYPGNRGSPASDKD KYTELVKVLNSELKKEAQTSGKDQLILSAAIPAGKSNIDPGYNVPEISKYVDMLNLMTYDLHGGSWEDVTGHNAPLHQSP KDKGNNTMLNVEWAAKYWVSKGAPKAKLNIGMPLYGRSFTLASPSNNGLYAPDRGNGGQAGKYTRESGFLAYYEICEMLK TGGTRHYLPDAMVPYLVKGDQWVGYDDPDSLKKKVDFVKQEGPVAQTTKGAAPTNKQTTPGSGSGPLVQSTTSAPSPACV NTGGGNSSGKRSVCYYANWAQYRSAPAKFLPENIDPTLCTHVMYSFAKLVNNHLAPFETNDESKGGTKGMYERVLDMKKQ NPSLKVSLAVGGWNMGSAPFSRMVSTDATRRDFATNAVKFLRDHGFDGLDIDWEYPANRGSPAGDKAKFVELMKVLDAEF KKEAQSSGKDKLLLSLAVPTGKSNIDSGYDVPQASKYVDMFNLMAYDLHGASWESFTGHNAPLYQSAGDSGNINVAWAAN YWAQKGAPKSKINIGMPLYGRTYNLANPGNNGVHAPDSGGGGPAGQYTKEAGTLAYFELCKMVKNVATRHFDNQAKVPYL VSGNEWISYDDAESLKAKVDFINKQGFGGAMVWSLDLDDFTGSVCGEGKYPLLRAINSGLGNTGAGSGSGTGCVTQATQK PTSGSSTTAKTTSAGQQTTKSTPASWTTAKPQVTTTQPQSTTHHIGLTQRFNCNGKASGFYADPSSCESYFICAGSQSFE VMCAKGLKFNPKTKYCDWSNQVKCGSDSSTTSQSQSQTTTLKQTTPPAPGMSTKSTPQSSTTTTSTTTTTTX |
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