Gene
| Gene Model ID | pfu_aug2.0_194.1_13769 |
|---|---|
| Locus | scaffold194.1 : 226355 ... 230330 : + |
| To GenomeBrowser | scaffold194.1:226355..230330 |
| Genes list of scaffold | scaffold194.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal rna methyltransferase 2 | GO:0032259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_194.1_13769.t1 | 1 | 1 | FtsJ | 2 | 177 | 0.0 | 163.0 | 0.0 | 0.0 | 162.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_194.1_13769.t1 | gi|260824435|ref|XP_002607173.1| | hypothetical protein BRAFLDRAFT_68032 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_194.1_13769.t1 | gi|558115456|ref|XP_006112938.1| | PREDICTED: putative ribosomal RNA methyltransferase 2 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_194.1_13769.t1 | gi|390341347|ref|XP_787303.2| | PREDICTED: rRNA methyltransferase 2, mitochondrial [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_194.1_13769.t1 | gi|328697206|ref|XP_001950144.2| | PREDICTED: putative ribosomal RNA methyltransferase CG11447 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_194.1_13769.t1 | gi|591381818|ref|XP_007065444.1| | PREDICTED: putative ribosomal RNA methyltransferase 2 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_194.1_13769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13769.t1 atggaaatagatgatagacataagatatttaaacctggtgataatgttgttgactgtggggcatcaccgggttcttggac tcaagttgctgtgcaaagagtaaatgcaaatcatttagacaagagaaagcctaggggattagtgattggcgttgatctaa aatccatggagccaattgagggtgccattcttttatccaacagtgatttcacatcctcagagacacgagagatgattgca aaacatctgatgggtgaaaaactgaatgttgttttgagcgatatggctcccaactcttctggtctgagacacttggacca tcaaattatagtaaaactcagcttttctgtgatgaagttctcagtgcaaactttaaggaaaagtggacatatggtttgta aactatgggatggaaatgaaaccaacatcgtcaaagagacagctcagaaattttttaaaactgttaaaatagtcaaacca gaagcaagtagaagtgattcggcagaaatttacgtcttgtgcaaagattttctgttagataacgaataa |
|
Protein
| Protein ID | pfu_aug2.0_194.1_13769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_194.1_13769.t1 MEIDDRHKIFKPGDNVVDCGASPGSWTQVAVQRVNANHLDKRKPRGLVIGVDLKSMEPIEGAILLSNSDFTSSETREMIA KHLMGEKLNVVLSDMAPNSSGLRHLDHQIIVKLSFSVMKFSVQTLRKSGHMVCKLWDGNETNIVKETAQKFFKTVKIVKP EASRSDSAEIYVLCKDFLLDNE |
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