Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_194.1_13772
Locus scaffold194.1 : 279855 ... 287842 : +
To GenomeBrowser scaffold194.1:279855..287842
Genes list of scaffold scaffold194.1
Synonym pfu_aug1.0_4323.1_44913

Manual annotation
Annotation by Blast2GO
Annotation GO
calcium-activated potassium channel slowpoke- partial GO:0016020 GO:0060072 GO:0071805

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_194.1_13772.t1 gi|524888506|ref|XP_005100823.1| PREDICTED: calcium-activated potassium channel slowpoke-like, partial [Aplysia californica] 0.0
pfu_aug2.0_194.1_13772.t1 gi|157138068|ref|XP_001657222.1| AAEL003765-PA, partial [Aedes aegypti] 0.0
pfu_aug2.0_194.1_13772.t1 gi|642936833|ref|XP_008197835.1| PREDICTED: calcium-activated potassium channel slowpoke isoform X1 [Tribolium castaneum] 0.0

Transcript
Transcript IDpfu_aug2.0_194.1_13772.t1
Definition-
>pfu_aug2.0_194.1_13772.t1
atgtgtaaccacgttgtcgtttgtttatttgccgattcacactcgccacttattggtctacgcaatcttgttatgccact
tagggccagcaatttccattacaaagagctcaaacatgtcgtcattgttggaaatattgagtacatcaagagagaatgga
aaactctgcaaaattttccaaaaataaccattttacccggttccccacttaaccgcgcaaatttacgtgcagtaaacgtt
aacctctgtgatatgtgtgtaatactatcagccaaggacagaaacttagacgaccaacatttagtcgacaaggaggccat
tttatgctctctcaatatcaaagctatgacgtttgatgacagtataggcttactccagtcatctgctcagcaagctccag
gctttttaccacctggattctctcctgtcgggagtcctgctagaatgtccaggagagggtctgtgtgcgggtccaatgtc
cctcttatcactgaacttgccaacgactctaacgtacagtttctggatcaggacgacgaggatgacccagatacagagtt
gtacatgacacagccgttcgcctgcggtaccgcattcgctgttagtgtactggattcccttatgagcacaagctacttca
atgacaatgccctgaccttgatccgtaccctgattacgggcggagccaccccagagctggagcagatcctagctgaaggg
gcagggatgagaggaggattctgtacccccagtgttctagccaacagggacagatgtagggtcgctcaggtctcactgtt
tgatggttctctagcgcagtttggtgaggatggtacctatggtgagctgttcctccatgctctccgcgagctgagcattc
tgtgtatcggcttgtacagattccgcgatacgacggaagcctctagtagtccttcatcaaagcgatatgtgataactaat
cccccggaagatttcaaactcctaccaacagaccaggttttctgtcttgcgccatgcaatctttcacaaagctcaaattc
ttcccttcggaatgaaaaaagtaagaatttagacagtcacctcttcccagattgctgtagacaaaatggctggctgtag

Protein
Protein IDpfu_aug2.0_194.1_13772.t1
Definition-
>pfu_aug2.0_194.1_13772.t1
MCNHVVVCLFADSHSPLIGLRNLVMPLRASNFHYKELKHVVIVGNIEYIKREWKTLQNFPKITILPGSPLNRANLRAVNV
NLCDMCVILSAKDRNLDDQHLVDKEAILCSLNIKAMTFDDSIGLLQSSAQQAPGFLPPGFSPVGSPARMSRRGSVCGSNV
PLITELANDSNVQFLDQDDEDDPDTELYMTQPFACGTAFAVSVLDSLMSTSYFNDNALTLIRTLITGGATPELEQILAEG
AGMRGGFCTPSVLANRDRCRVAQVSLFDGSLAQFGEDGTYGELFLHALRELSILCIGLYRFRDTTEASSSPSSKRYVITN
PPEDFKLLPTDQVFCLAPCNLSQSSNSSLRNEKSKNLDSHLFPDCCRQNGWL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495