Gene
| Gene Model ID | pfu_aug2.0_1950.1_01916 |
|---|---|
| Locus | scaffold1950.1 : 21856 ... 22685 : + |
| To GenomeBrowser | scaffold1950.1:21856..22685 |
| Genes list of scaffold | scaffold1950.1 |
| Synonym | pfu_aug1.0_857.1_00520 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1950.1_01916.t1 | 1 | 1 | DDE_1 | 66 | 118 | 1.9e-06 | 27.1 | 6.3e-10 | 3.1e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1950.1_01916.t1 | gi|391340287|ref|XP_003744474.1| | PREDICTED: tigger transposable element-derived protein 6-like [Metaseiulus occidentalis] | 4.0e-22 |
| pfu_aug2.0_1950.1_01916.t1 | gi|391330819|ref|XP_003739850.1| | PREDICTED: tigger transposable element-derived protein 6-like [Metaseiulus occidentalis] | 7.0e-22 |
| pfu_aug2.0_1950.1_01916.t1 | gi|391344599|ref|XP_003746583.1| | PREDICTED: tigger transposable element-derived protein 6-like [Metaseiulus occidentalis] | 8.0e-22 |
| pfu_aug2.0_1950.1_01916.t1 | gi|291240140|ref|XP_002739978.1| | PREDICTED: tigger transposable element-derived protein 6-like [Saccoglossus kowalevskii] | 1.0e-21 |
| pfu_aug2.0_1950.1_01916.t1 | gi|585662282|ref|XP_002734936.2| | PREDICTED: tigger transposable element-derived protein 6-like [Saccoglossus kowalevskii] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_1950.1_01916.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1950.1_01916.t1 atgcaagagaatgccagggtcttcgcactcaaacttggagctccaggctcagagttcgactgttccgttggttggttaga gctatttaaagccaggcacgtcatagtctttaaaagggtatggggcgaatcgaatgacgttgcgaccgattcggaagcat tgtcagattggactgccactatccttaatgacttctccgcatcagacgttttcaacgctaacgagacaggcatattctat aaacgtatgccagacaaaacgctagaattcaagtctgtcagttctcatggtggtaaacaaagcaaagagcgcctaaaaat gatggtggccgccaataagtctgacacacgcagcatagttaaggctaatctcggaaatttttgcggtaaaattgcgtacc tgatttag |
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Protein
| Protein ID | pfu_aug2.0_1950.1_01916.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1950.1_01916.t1 MQENARVFALKLGAPGSEFDCSVGWLELFKARHVIVFKRVWGESNDVATDSEALSDWTATILNDFSASDVFNANETGIFY KRMPDKTLEFKSVSSHGGKQSKERLKMMVAANKSDTRSIVKANLGNFCGKIAYLI |
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