Gene
| Gene Model ID | pfu_aug2.0_1955.1_18610 |
|---|---|
| Locus | scaffold1955.1 : 17031 ... 22585 : - |
| To GenomeBrowser | scaffold1955.1:17031..22585 |
| Genes list of scaffold | scaffold1955.1 |
| Synonym | pfu_aug1.0_7719.1_09622 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1955.1_18610.t1 | 2 | 1 | 4HBT_2 | 24 | 42 | 5.5e-20 | 72.0 | 0.26 | 1900.0 | -0.8 |
| pfu_aug2.0_1955.1_18610.t1 | 2 | 2 | 4HBT_2 | 50 | 177 | 5.5e-20 | 72.0 | 2.2e-23 | 1.6e-19 | 70.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1955.1_18610.t1 | gi|676435239|ref|XP_009047492.1| | hypothetical protein LOTGIDRAFT_97270, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1955.1_18610.t1 | gi|260812247|ref|XP_002600832.1| | hypothetical protein BRAFLDRAFT_214987 [Branchiostoma floridae] | 3.0e-40 |
| pfu_aug2.0_1955.1_18610.t1 | gi|632972389|ref|XP_007902634.1| | PREDICTED: protein THEM6 [Callorhinchus milii] | 2.0e-37 |
| pfu_aug2.0_1955.1_18610.t1 | gi|187607567|ref|NP_001119977.1| | protein THEM6 precursor [Xenopus (Silurana) tropicalis] | 3.0e-37 |
| pfu_aug2.0_1955.1_18610.t1 | gi|147899964|ref|NP_001084794.1| | protein THEM6 precursor [Xenopus laevis] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_1955.1_18610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1955.1_18610.t1 atggttttcttatatattacattgattttgctaattctgttcgatgtatcttacttcattcgcagttacatcactattct aacgtatgcagtcttgagctttttcactaaacatcgatttacagatgaaatagatttacacggtatatgtctaacaactg accttgacaatctgtggcatatgaacaattcccgttacctacgggaatgtgactttggacgtatgaagcttttcctgatg acgagtgtgtggaaagccgtgactaaatgtggtggatcctttgtcaacgcaggaaataatatacgctacaggaagtctat agaactgttagaccggtacatcatcaggtcaaagataatttattgggatgagaaagcgttttatgtgaatcaacatttca tacgtgcaagagacaactttatatgtgccgtaaacatagcaaagatggccaccatagggactacacctgccaatattata aggacattggaagggagggacattcccccacccaccccaggaccggaattaatcaaacttatggaatcatggcagctttc cagtgaaaatctcaggaagaattcctga |
|
Protein
| Protein ID | pfu_aug2.0_1955.1_18610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1955.1_18610.t1 MVFLYITLILLILFDVSYFIRSYITILTYAVLSFFTKHRFTDEIDLHGICLTTDLDNLWHMNNSRYLRECDFGRMKLFLM TSVWKAVTKCGGSFVNAGNNIRYRKSIELLDRYIIRSKIIYWDEKAFYVNQHFIRARDNFICAVNIAKMATIGTTPANII RTLEGRDIPPPTPGPELIKLMESWQLSSENLRKNS |
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