Gene
| Gene Model ID | pfu_aug2.0_1956.1_21873 |
|---|---|
| Locus | scaffold1956.1 : 104776 ... 123299 : + |
| To GenomeBrowser | scaffold1956.1:104776..123299 |
| Genes list of scaffold | scaffold1956.1 |
| Synonym | pfu_aug1.0_10663.1_17659 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1956.1_21873.t1 | 2 | 1 | fn3 | 137 | 218 | 1.0e-07 | 31.9 | 3.1e-08 | 0.00023 | 21.2 |
| pfu_aug2.0_1956.1_21873.t1 | 2 | 2 | fn3 | 245 | 320 | 1.0e-07 | 31.9 | 3.8e-06 | 0.028 | 14.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1956.1_21873.t1 | gi|676476182|ref|XP_009060711.1| | hypothetical protein LOTGIDRAFT_165448 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_1956.1_21873.t1 | gi|676425677|ref|XP_009044381.1| | hypothetical protein LOTGIDRAFT_156113 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_1956.1_21873.t1 | gi|676455021|ref|XP_009053871.1| | hypothetical protein LOTGIDRAFT_160493 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_1956.1_21873.t1 | gi|676440484|ref|XP_009049191.1| | hypothetical protein LOTGIDRAFT_177064, partial [Lottia gigantea] | 3.0e-16 |
| pfu_aug2.0_1956.1_21873.t1 | gi|676445371|ref|XP_009050732.1| | hypothetical protein LOTGIDRAFT_174151 [Lottia gigantea] | 6.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_1956.1_21873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1956.1_21873.t1 atgtgcttagataatgatatacctgtagctggtacattgaaagcagatttggtgtcatcactcattacttttcagacacc atgcgatgcccttgtccctgttaggtcgaagacaagtcatgaggctttgatacctacgtgtactagtaggtctactgatt cagggtcagatattgttttaccaccgtttcacaaagttgactacgtgtctgtgccaattcaggacctgccaaagccatca ttttcatctatttataactatatgatagtacgatctcgtgagaatgacacaggagtggaaaattttaaagggttggatag ggctgtccaacattttgatgcaggggacatccaagatatctctatatctcagactctaatgtccagtccaggaagtaatg aaccaaataaacccactatcacagcagtgacagatatagggcagacacaaataaaacttcaatggaacataacaggacct agaccagggcccaccaatatcacagtaacagtgtatgaagtcataggaaatacacgatctgtgaacaagactgttctgtt tgaatcagcattcaatagaagtgactacatactgatgaatctggaagagtattgggattaccagtttactgttacagcag ctactgttatcggctctgttacttcagatatgtctgctgtttacaggaccttaccaactgctcctggtaaagtattgtat cttactgttgttaaagcttatccaaataagtacacagctgtacaagtatcatggaaaatcccacctctacatcaaaggaa cagctacctggataaatacatcattgtccagaactttactacgggatccaacaataatgtagagattcccgtcaacttaa atcaagaaatacacatacagatgtttcgtgtgacaccagaaacttactacagtgtggagagcgtagtgacaacagccgca ggtggtgaacaagctcagacaacaacgtttgttgtggagctaaatataaactccttcattgacaacaccaatggccgggt ggaatactatggtcttgctgtgtgtaggagagataaatatatgcagcaggatgctttctcagatgaatggataaatctac ctaattaccagacagccaaagaccaaggttatcctccatacagggtgactgatggaagattcattcaaagagtgattcaa atca |
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Protein
| Protein ID | pfu_aug2.0_1956.1_21873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1956.1_21873.t1 MCLDNDIPVAGTLKADLVSSLITFQTPCDALVPVRSKTSHEALIPTCTSRSTDSGSDIVLPPFHKVDYVSVPIQDLPKPS FSSIYNYMIVRSRENDTGVENFKGLDRAVQHFDAGDIQDISISQTLMSSPGSNEPNKPTITAVTDIGQTQIKLQWNITGP RPGPTNITVTVYEVIGNTRSVNKTVLFESAFNRSDYILMNLEEYWDYQFTVTAATVIGSVTSDMSAVYRTLPTAPGKVLY LTVVKAYPNKYTAVQVSWKIPPLHQRNSYLDKYIIVQNFTTGSNNNVEIPVNLNQEIHIQMFRVTPETYYSVESVVTTAA GGEQAQTTTFVVELNINSFIDNTNGRVEYYGLAVCRRDKYMQQDAFSDEWINLPNYQTAKDQGYPPYRVTDGRFIQRVIQ I |
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