Gene
| Gene Model ID | pfu_aug2.0_1957.1_25218 |
|---|---|
| Locus | scaffold1957.1 : 1 ... 5473 : + |
| To GenomeBrowser | scaffold1957.1:1..5473 |
| Genes list of scaffold | scaffold1957.1 |
| Synonym | pfu_aug1.0_86903.1_06080 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1957.1_25218.t1 | 1 | 1 | zf-Di19 | 29 | 81 | 3.6e-06 | 27.0 | 1.1e-08 | 6.8e-06 | 26.1 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 1 | zf-C2H2 | 30 | 53 | 1.2e-10 | 41.0 | 1.2e-07 | 7.6e-05 | 22.8 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 1 | zf-C2H2_4 | 30 | 53 | 5.2e-09 | 35.8 | 2.3e-07 | 0.00015 | 21.8 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 1 | zf-met | 30 | 50 | 1.8e-07 | 31.1 | 2.2e-05 | 0.014 | 15.5 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 1 | zf-C2H2_jaz | 30 | 51 | 3.8e-07 | 30.0 | 2.6e-07 | 0.00017 | 21.6 |
| pfu_aug2.0_1957.1_25218.t1 | 3 | 1 | zf-H2C2_2 | 30 | 40 | 4.0e-07 | 30.0 | 0.00014 | 0.088 | 13.1 |
| pfu_aug2.0_1957.1_25218.t1 | 3 | 2 | zf-H2C2_2 | 45 | 68 | 4.0e-07 | 30.0 | 2.5e-05 | 0.016 | 15.4 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 2 | zf-C2H2 | 59 | 81 | 1.2e-10 | 41.0 | 1.5e-07 | 9.6e-05 | 22.5 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 2 | zf-met | 59 | 78 | 1.8e-07 | 31.1 | 4.8e-05 | 0.031 | 14.4 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 2 | zf-C2H2_4 | 60 | 78 | 5.2e-09 | 35.8 | 7.9e-06 | 0.0051 | 17.0 |
| pfu_aug2.0_1957.1_25218.t1 | 2 | 2 | zf-C2H2_jaz | 60 | 78 | 3.8e-07 | 30.0 | 0.0047 | 3.1 | 8.0 |
| pfu_aug2.0_1957.1_25218.t1 | 3 | 3 | zf-H2C2_2 | 73 | 82 | 4.0e-07 | 30.0 | 0.29 | 180.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1957.1_25218.t1 | gi|367003783|ref|XP_003686625.1| | hypothetical protein TPHA_0G03510 [Tetrapisispora phaffii CBS 4417] | 3.0e-08 |
| pfu_aug2.0_1957.1_25218.t1 | gi|524916766|ref|XP_005113153.1| | PREDICTED: mucin-19-like, partial [Aplysia californica] | 2.0e-07 |
| pfu_aug2.0_1957.1_25218.t1 | gi|363756548|ref|XP_003648490.1| | hypothetical protein Ecym_8403 [Eremothecium cymbalariae DBVPG#7215] | 5.0e-07 |
| pfu_aug2.0_1957.1_25218.t1 | gi|365983276|ref|XP_003668471.1| | hypothetical protein NDAI_0B01930 [Naumovozyma dairenensis CBS 421] | 5.0e-07 |
| pfu_aug2.0_1957.1_25218.t1 | gi|551529070|ref|XP_005816000.1| | PREDICTED: zinc finger protein PLAG1-like, partial [Xiphophorus maculatus] | 7.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1957.1_25218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1957.1_25218.t1 gtcaccgttcaagccagaaacaatatgaacctaggcggcagatattttcagggtctaaaagttcaatatcagcgaatgca cctgctgaatttgagtgcgaattttgtggcaagtatttcacaaaacgcaaagttttaaatcgtcatatccagacggtcca tgaggggaagtcgaccacatgtgaaatttgcggtctttccttcagccgtaaagacagttatcttcggcatctgaaattta aacatcaacaggatgatggacttgtacgggaagagagtacagacaaaacaaacaaagcaaatgcaaatgacaatgaagag aaatcggaaacagaaaaatgtgattcctcagaaaatgatgatttagaaatggaatgtatttcggaggaggagaaggacga catcaacgataatttgggaaactattcaatagaagaaaatggcaagtcattatattaa |
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Protein
| Protein ID | pfu_aug2.0_1957.1_25218.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1957.1_25218.t1 HRSSQKQYEPRRQIFSGSKSSISANAPAEFECEFCGKYFTKRKVLNRHIQTVHEGKSTTCEICGLSFSRKDSYLRHLKFK HQQDDGLVREESTDKTNKANANDNEEKSETEKCDSSENDDLEMECISEEEKDDINDNLGNYSIEENGKSLY |
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