Gene
| Gene Model ID | pfu_aug2.0_1964.1_15329 |
|---|---|
| Locus | scaffold1964.1 : 6396 ... 14885 : - |
| To GenomeBrowser | scaffold1964.1:6396..14885 |
| Genes list of scaffold | scaffold1964.1 |
| Synonym | pfu_aug1.0_2295.1_01042 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1964.1_15329.t1 | 1 | 1 | C1q | 163 | 291 | 2.3e-17 | 63.1 | 4.4e-20 | 4.1e-17 | 62.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1964.1_15329.t1 | gi|656214630|ref|NP_001280633.1| | complement C1q-like protein 4-like precursor [Danio rerio] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1964.1_15329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1964.1_15329.t1 atgttcctgaaattattgttttgtgtaatagttgttttcacggcggcttttgctgatgagaaaaggattctgctcagtga ttctggatcctatcaggatagtttagacagactggaagcaaagctcctaggtatggaaaccgaaatgtcgtcgctgaaaa acatggtgactgctcagaacgtaactatcaattccttaaagactcaacttgcagtgaagattgtcgtgtcgtttttgtgg gttgtagttttatctggtgtcatttacgaatcactttcttgtggatttgtttcgctgggtcacctggttgtgttcacaat aggttttgctgatgagaaacgaattctgctcaacgatcctggtttctaccaggatagcctggccagactggagtcaaagc tcgtgggcatggaaaccaaaatggcgtcgatgaatgcaactatcaattccctaaagacgcagatagcagcaaaggaccca agtgttgcatttatggccaccatggacaataacttggttaacccatcaaccaatcacataatcatattcaatcacgtgat gacaaatgtaggcaatgcgtataatccacacactgggacttttacagcgcctctaagtgggacgtatttttttgctttgg ctcttgcttcaccgactgctgctgggggacatttgggcatctggcttcaaaaggatggtgctagtgttgcatacctgttt ttcgatgtccatagccattactgggtaaaacggacagatactactgctgtacacatgaataaaggagagagtctctacgc catcattaattccgtacttggaaaccataccatagctgggagtctaaacagcaatttgtctggtttccttatccaagctg attag |
|
Protein
| Protein ID | pfu_aug2.0_1964.1_15329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1964.1_15329.t1 MFLKLLFCVIVVFTAAFADEKRILLSDSGSYQDSLDRLEAKLLGMETEMSSLKNMVTAQNVTINSLKTQLAVKIVVSFLW VVVLSGVIYESLSCGFVSLGHLVVFTIGFADEKRILLNDPGFYQDSLARLESKLVGMETKMASMNATINSLKTQIAAKDP SVAFMATMDNNLVNPSTNHIIIFNHVMTNVGNAYNPHTGTFTAPLSGTYFFALALASPTAAGGHLGIWLQKDGASVAYLF FDVHSHYWVKRTDTTAVHMNKGESLYAIINSVLGNHTIAGSLNSNLSGFLIQAD |
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