Gene
| Gene Model ID | pfu_aug2.0_197.1_23645 |
|---|---|
| Locus | scaffold197.1 : 49568 ... 76755 : - |
| To GenomeBrowser | scaffold197.1:49568..76755 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug1.0_22281.1_04204 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tbcc domain-containing protein 1 | GO:0016043 GO:0044763 GO:0065007 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_197.1_23645.t1 | 1 | 1 | CAP_C | 287 | 386 | 8.6e-07 | 28.4 | 1.9e-10 | 1.4e-06 | 27.7 |
| pfu_aug2.0_197.1_23645.t1 | 1 | 1 | TBCC | 316 | 430 | 3.5e-30 | 103.8 | 8.9e-34 | 6.6e-30 | 102.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_197.1_23645.t1 | gi|524879951|ref|XP_005096644.1| | PREDICTED: TBCC domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_197.1_23645.t1 | gi|676449049|ref|XP_009051929.1| | hypothetical protein LOTGIDRAFT_231523 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_197.1_23645.t1 | gi|291233767|ref|XP_002736825.1| | PREDICTED: TBCC domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_197.1_23645.t1 | gi|260803443|ref|XP_002596599.1| | hypothetical protein BRAFLDRAFT_219212 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_197.1_23645.t1 | gi|390352120|ref|XP_003727821.1| | PREDICTED: TBCC domain-containing protein 1 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_197.1_23645.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23645.t1 atggttaattttatgcctggtaagaatataaagaaaattgtgacgtatacaaagaataaagctccagtgggatttcctaa tttaagctactcagtatggaagagaatagcatgtacaaagcttcacctgtcagaagacctggcctggctgtattattcca cgtgccacttgttcagtgagaatatgtcccctgtagagaaaatcgagtgggaccagaagttcacagaagctaccacaaac ctacagagagatgagatcaagtcgtcattatccgttaacactctgaagtttgcgttatttctttacatccagcaaatctt taaagtatctctcaaggcttctctggtagctggagatgaatggccgaccagcagaagtccctcaccagacctggagagtg ccaggaacacaccaagaggaaacaagacaatggatgatcatggtcacatggtttttgtacagaatcatctccatgagatg cttgaattactcgtagaaccagaaaactactgctctacaaatactggtgaatctgcattaacagatttagctgtagaagc tctcggtttccttatagcaggatctgtcgataggtcaagatccctgcttccattacaggacatagctacattacagacaa cacagcatagaagtggttattccaagataacgaagatgtttactctccgtcctttaatgaactggatcaaagagaacctt gtacagaatccatttggtatatcagcgtgcatcgctagtggtcgcaggttgtcatggcccttggcaggggaagagaaaga caagaccgatacattagccaagaggggtaaaatcgccactaatgctcatactgtgccgaaagaacatataaaaggaaaca aaatcattatcatgagccaagtcagcaagcaaacaatagctaggaattcaggaaccctagaaaacagcagtgtgaaaatc caccgtagtcattactcgttcttgtatctattgtcaccattaagatctgtaacagtagagaagtgtcgtaacaccactgt tgttctagggccggtagaaaccacactctacataagtcactgtgagaatgtcaccgttatagccagctgtcgtaatgtta tgatcagtggtagtacactgtgtaccttgtacttgctgaccccaaatcgaccattgatactgggaggtaatgacaccatc ttactggccccctaccacaccttttaccccgccttggaggaacatctcagtaggattggtattggatgtcaacgtaactt atgggaccaaccactgtgtgtgggtccagatcacaaagatgaaatccctgtctgggagctcttaccacttatagagttct tcacctttaatataccttttgaaatggaaggaaaaactcaggtttggttagcagagtctggatttaaacgggagttagac agccttgttgttcctttacaaacaactacaaagaaatga |
|
Protein
| Protein ID | pfu_aug2.0_197.1_23645.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23645.t1 MVNFMPGKNIKKIVTYTKNKAPVGFPNLSYSVWKRIACTKLHLSEDLAWLYYSTCHLFSENMSPVEKIEWDQKFTEATTN LQRDEIKSSLSVNTLKFALFLYIQQIFKVSLKASLVAGDEWPTSRSPSPDLESARNTPRGNKTMDDHGHMVFVQNHLHEM LELLVEPENYCSTNTGESALTDLAVEALGFLIAGSVDRSRSLLPLQDIATLQTTQHRSGYSKITKMFTLRPLMNWIKENL VQNPFGISACIASGRRLSWPLAGEEKDKTDTLAKRGKIATNAHTVPKEHIKGNKIIIMSQVSKQTIARNSGTLENSSVKI HRSHYSFLYLLSPLRSVTVEKCRNTTVVLGPVETTLYISHCENVTVIASCRNVMISGSTLCTLYLLTPNRPLILGGNDTI LLAPYHTFYPALEEHLSRIGIGCQRNLWDQPLCVGPDHKDEIPVWELLPLIEFFTFNIPFEMEGKTQVWLAESGFKRELD SLVVPLQTTTKK |
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