Gene
| Gene Model ID | pfu_aug2.0_197.1_23647 |
|---|---|
| Locus | scaffold197.1 : 88037 ... 115975 : - |
| To GenomeBrowser | scaffold197.1:88037..115975 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug1.0_10273.1_60754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_197.1_23647.t1 | 1 | 1 | Tcp10_C | 1054 | 1219 | 0.0 | 252.0 | 0.0 | 0.0 | 249.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_197.1_23647.t1 | gi|585649302|ref|XP_006814364.1| | PREDICTED: centromere protein J-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_197.1_23647.t1 | gi|632974641|ref|XP_007903791.1| | PREDICTED: centromere protein J isoform X5 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_197.1_23647.t1 | gi|632974637|ref|XP_007903789.1| | PREDICTED: centromere protein J isoform X3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_197.1_23647.t1 | gi|632974639|ref|XP_007903790.1| | PREDICTED: centromere protein J isoform X4 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_197.1_23647.t1 | gi|632974633|ref|XP_007903787.1| | PREDICTED: centromere protein J isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_197.1_23647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23647.t1 atggatcaaagcagacagatttctactccgccccttgacagtatgcccgtgatgcagtccaagataccaccagaaatgtt cctaagacccatcaattttgatacggcgttaaaaggcaaacagtctggtaatcctgaaatgagaaatgtacactctggag tgacaggtgccgtgaatcatattcctgatgacgttagcgacgaggaaagcttagaagaaatgtccctgaataaaagtcaa atgggtggaaaagtcaaactagctgacaatacaaccaggactcctcccaggtcaacgagacatcatccccacaggggtca aggtcatgccaaggccaaaggtcaaagtcaacccccacaaacttcacagcaaagagtgggtcagttacctgcccctgtga tgtatgttccgttaaatgatgataacgatgaaatcaagacaaacccagatttattcagtgatactaattcacaagctggc agtcatgctacgacggaagatggatttgtacagctccctgattcagcgtcagaagttgggattcggacaaagctaacgtt tatggatgaagatgagctagacgaaggcatcggtacgcaatcaatccaatctcctgggagaggagaaaaattaacgagag ttcaacctgcaaataaaccccgagtccctgaagttacaagtgacagtgggagtgaattggaagagcaaagtctggaggat gagaatgaagtggagagtgaaataagtgaagaagaacaagatgatgatgatgaggaggaggatgatgatgatgaagatac aagatttatacatgataaagatgacaggaacatagatgataaacctgtaactggaacatcaaaaacatttgaggaattac tagaagaacagcttagggcagaggaggaaaagcaaccgcaaaagactttatcattaaaaaagtcctctccaaagaagcaa caaccgtccaaaatatcgccgagagaacctgtctcaaaaccatcccagaattccaaggggaaagtctcaaaaccctctga ctcatccaagtcttcacagctatcaaaagataagacacagaaacttgaagctctcaatgcaaagatgctgagtaaaggaa acgatagagagagtcataaccaagcgagacaggccggtaaaatgacgtcatcacagcagaaacataccggacatccttct ataccaagtaaagagaatactgtcaactccagagcaccggaatcaatacctgacgatgaatcgtttgtcggcaggattaa agagagagaaaaaaatgaagagttacagtcacccagaactactgttgctaagcagttagaagctacactgaagcgaggtg gtcaacaaacagatactgagggggaagaaaaagaaatagaggatgataatgatgatgacgatgatagtgagtttgagttg tccgagtctgaaagtgagtcatcttcagactcggatagcgagtctgaaaacttgagaactttgacctctccttccaaggt catgacccgaaaaattgcatcaaatcgggataggactagtcttaacagtgcatatactacagatagaacgggggaaagtg ttgtggtgaatgaaaaaacggctctcgatacagtgaataatttactcaagcgattaacggaaaaacagttaggaagtcag gttgtggaaaaacaactgatatcctctgaacccactcaactttcaatggaattctctcaacttatcaaatcgccaatagt gatttcaaaggagggtggcgaaatccgagatttcagaaaaaatgacaacaatggtgttgaccacgatggttcttttcatt tacatggaaaattttctagtcaaggaggcatgtttggtgtcaataaagtggtcagtaaaagtgacgacgatgcagaattg agtgacggaagtttgagttcgtattctgatctaaaaatatcaaaacggcagcaaaactatggagactcggaaaatgaaca acggattggaagtaattatcataataatgaaagctcacaaagtgaaagtgaagaccttaaagacagtgatgaagaagata gatttgatgatgaagaagaatggaacgatttaactcctaaagcaaaatccccagcaaagcatagtcatcttggtgatacg gaggagggtccacccacgtctaagcttgtatccaaactattccccaacctcaaacctccgcagaccaagcaacaagcaga gaatcagcagaggttacagtcagtaacgagtacggcgacatcagacggagtacagtctaaactgatgagggagaagttaa ctcagctggaaatggagattgaaaaattcaaaaacgaaaacttaaacctggaaagactcaggaaagagagggaagagggc ctagctaaactgaaaaaggaaattgcagcctttgaaaaagaaaaaagtgaagaattaaaacgtttacaagattacaagat agaagaaacaaagaaactcaaacatgaaaagaaaatgtttgagaaatatcagaaagctgctagagagatgcccaacaaga aggagagagaggaaatagaaatgctcaaatcccagttgactgaccttcaagatgagatgaagagaaaagaaagtcgctgg acctcaaacaatgcccggctacggagtaaactagagctcctggagcaagaaaacacggaactcaaagaggaaatcaaact gatggagatgaaacgactagaatggctacagaaagaacaaagttcgaagaagggagcacaaaggaatataggtaccacta acgctgcctactcacagaagattagtaaacagttcacaagtaattctgccgacttccaaaccacggactctgatgaagaa actgatcctgttagagatgagtccaacccacactccctgcaggacactgtgaactcaaacacgatgtctttacgaccgtc acagtatgaaaatcttgttaacgttcgagctcctccagccaactcaaagaccgctcccatgcaacaaaaactgccagctc cctctggtgagacgtcaatggtggatctacctaggaagaccaatcagaaaccaggaattagtaaatctgtcatcaacaag ggggacaagggatatgatgaaatgacacacactgacggcaaggtggagagaatctacagtacaggggctcgagaaattct cttcactaatggcaccaggaaggagatatcggcagacggacagtatatctcagtgtctttnctgcacatatactattact cagagacccaggctacacacactacgtacccggatggattagagatattacaattccctaataaccaagtagagaaacat tatccagacggcactaaggagattaccttcccagatcagatcattaagtacctgttccccagtggatcggaggagagtat attccctgatggtaccgtaattaaggtggatcgtaacggagataaaacgatagaattccctaacggacaacgggagattc acaatcaagaatataagagaagagaatatccagatggcactgtgaaaactgtatacccagacggaaaacaggaaactcgc tactcaaacggcagaattagggtcaaggacaaagacgggaatatcatcgtggacaagcgatgctga |
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Protein
| Protein ID | pfu_aug2.0_197.1_23647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23647.t1 MDQSRQISTPPLDSMPVMQSKIPPEMFLRPINFDTALKGKQSGNPEMRNVHSGVTGAVNHIPDDVSDEESLEEMSLNKSQ MGGKVKLADNTTRTPPRSTRHHPHRGQGHAKAKGQSQPPQTSQQRVGQLPAPVMYVPLNDDNDEIKTNPDLFSDTNSQAG SHATTEDGFVQLPDSASEVGIRTKLTFMDEDELDEGIGTQSIQSPGRGEKLTRVQPANKPRVPEVTSDSGSELEEQSLED ENEVESEISEEEQDDDDEEEDDDDEDTRFIHDKDDRNIDDKPVTGTSKTFEELLEEQLRAEEEKQPQKTLSLKKSSPKKQ QPSKISPREPVSKPSQNSKGKVSKPSDSSKSSQLSKDKTQKLEALNAKMLSKGNDRESHNQARQAGKMTSSQQKHTGHPS IPSKENTVNSRAPESIPDDESFVGRIKEREKNEELQSPRTTVAKQLEATLKRGGQQTDTEGEEKEIEDDNDDDDDSEFEL SESESESSSDSDSESENLRTLTSPSKVMTRKIASNRDRTSLNSAYTTDRTGESVVVNEKTALDTVNNLLKRLTEKQLGSQ VVEKQLISSEPTQLSMEFSQLIKSPIVISKEGGEIRDFRKNDNNGVDHDGSFHLHGKFSSQGGMFGVNKVVSKSDDDAEL SDGSLSSYSDLKISKRQQNYGDSENEQRIGSNYHNNESSQSESEDLKDSDEEDRFDDEEEWNDLTPKAKSPAKHSHLGDT EEGPPTSKLVSKLFPNLKPPQTKQQAENQQRLQSVTSTATSDGVQSKLMREKLTQLEMEIEKFKNENLNLERLRKEREEG LAKLKKEIAAFEKEKSEELKRLQDYKIEETKKLKHEKKMFEKYQKAAREMPNKKEREEIEMLKSQLTDLQDEMKRKESRW TSNNARLRSKLELLEQENTELKEEIKLMEMKRLEWLQKEQSSKKGAQRNIGTTNAAYSQKISKQFTSNSADFQTTDSDEE TDPVRDESNPHSLQDTVNSNTMSLRPSQYENLVNVRAPPANSKTAPMQQKLPAPSGETSMVDLPRKTNQKPGISKSVINK GDKGYDEMTHTDGKVERIYSTGAREILFTNGTRKEISADGQYISVSXLHIYYYSETQATHTTYPDGLEILQFPNNQVEKH YPDGTKEITFPDQIIKYLFPSGSEESIFPDGTVIKVDRNGDKTIEFPNGQREIHNQEYKRREYPDGTVKTVYPDGKQETR YSNGRIRVKDKDGNIIVDKRC |
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