Gene
| Gene Model ID | pfu_aug2.0_197.1_23653 |
|---|---|
| Locus | scaffold197.1 : 295233 ... 335451 : - |
| To GenomeBrowser | scaffold197.1:295233..335451 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug1.0_5874.1_52638 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_197.1_23653.t1 | 3 | 1 | MFS_1 | 87 | 309 | 1.1e-31 | 109.9 | 6.6e-25 | 2.4e-21 | 75.8 |
| pfu_aug2.0_197.1_23653.t1 | 1 | 1 | Sugar_tr | 97 | 482 | 4.7e-29 | 101.2 | 6.5e-32 | 2.4e-28 | 98.9 |
| pfu_aug2.0_197.1_23653.t1 | 3 | 2 | MFS_1 | 344 | 476 | 1.1e-31 | 109.9 | 1.2e-14 | 4.3e-11 | 42.1 |
| pfu_aug2.0_197.1_23653.t1 | 3 | 3 | MFS_1 | 490 | 516 | 1.1e-31 | 109.9 | 0.075 | 280.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_197.1_23653.t1 | gi|524916652|ref|XP_005113099.1| | PREDICTED: putative transporter SVOPL-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_197.1_23653.t1 | gi|507676100|ref|XP_004709698.1| | 0.0 | |
| pfu_aug2.0_197.1_23653.t1 | gi|301604934|ref|XP_002932106.1| | PREDICTED: synaptic vesicle 2-related protein isoform X2 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_197.1_23653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23653.t1 atggagctgtttgcagatttcacacagccaaattcttatggtgttgagccgaggtcaagggccaaggtcagatatacaaa gctaaatcaccatgacaacaaagatgaccttgaggaagccgaaggaggtttggcttgtgtggagttacaggaagggtcca tggatgactcggatggttatcaatccgctggatccaccacatccacacggattaaatcctacaccgtggaggaggctgtg gaagctatcggatttggctggttccaagttcggcttttcttcctatgtggattatttactgtggtgtttattggtatgtg tattatggcccctgtatggggagttataggggacaggtacggcaggcaggtgacgctgtacatggtgacattatggatag gatattttggtttcctgaccaccttcagtccctcctttgtttggctacttatacttagaggtcttgttggctctggttta gcagggtcaccccaggggtttgctctaatgacggaatatcttccctcaaaatctcgtgccaaaatgcttcttttaggaaa tatagcttgggctagcggtaccctgtttgagattacgatggcgtcattcgtcataccctcactgggatggaggtggctgt tagtattctctgcggcaccgtcctttatcatcgtcattttactcaagtggcttcctgaatctgccagatatttagttgca gcaggaaataaagaggacgccatgaaaatattacaaaaagcagcgaaaatcaataataaatctctaccagagggaaggct gatagcatctgtagctgccagacgaggtgatttcagaaatctcttttcaccagagtaccgtcgtacaacattacaagtat ggtttatgtggtttgtctctgctttctcatattacggtatggtgttagccagtgctgagatcctacaactacacaatgag agatctggggagacggacacctgcatgtgtaatcagttaaagtcggatgactacgtggccattatcatttcaacattagg agaatttataaatttaccaatcaacatgagtcttatagacaggataggaagacgatatactggtgctgtaaattgtgcgt gttgtgccatattctttatactgttacagatacacatgcctcagcagttattaacggcaattatgttcatggtacggggg ttctcacaaggaatgttcagctttgcctatatttataccggcgaggtctaccccacatctataagaaccctgggtatagg gtcggcatcagcgtgggcgagggtcggcgccatgataacaccttttgtagctcaggtcctattagataagtcagtacaag cagcggtgtgggtgtacggggcgttcggtatatcagcagctgtttgtgctgcactccttcccatcgagacgaaaggcaga gatttacccgtcctattagataagtcagtacaagcagcagtgtgggtctacggggcgttcggtatatcagcagctgtttg tgccgcactccttcccatcgagacgaaaggcagagatttacccgatggtgaggaaagggtttgtgaccaagcgatgatac ctcacccctgtatgtga |
|
Protein
| Protein ID | pfu_aug2.0_197.1_23653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23653.t1 MELFADFTQPNSYGVEPRSRAKVRYTKLNHHDNKDDLEEAEGGLACVELQEGSMDDSDGYQSAGSTTSTRIKSYTVEEAV EAIGFGWFQVRLFFLCGLFTVVFIGMCIMAPVWGVIGDRYGRQVTLYMVTLWIGYFGFLTTFSPSFVWLLILRGLVGSGL AGSPQGFALMTEYLPSKSRAKMLLLGNIAWASGTLFEITMASFVIPSLGWRWLLVFSAAPSFIIVILLKWLPESARYLVA AGNKEDAMKILQKAAKINNKSLPEGRLIASVAARRGDFRNLFSPEYRRTTLQVWFMWFVSAFSYYGMVLASAEILQLHNE RSGETDTCMCNQLKSDDYVAIIISTLGEFINLPINMSLIDRIGRRYTGAVNCACCAIFFILLQIHMPQQLLTAIMFMVRG FSQGMFSFAYIYTGEVYPTSIRTLGIGSASAWARVGAMITPFVAQVLLDKSVQAAVWVYGAFGISAAVCAALLPIETKGR DLPVLLDKSVQAAVWVYGAFGISAAVCAALLPIETKGRDLPDGEERVCDQAMIPHPCM |
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