Gene
| Gene Model ID | pfu_aug2.0_197.1_23654 |
|---|---|
| Locus | scaffold197.1 : 342846 ... 350170 : + |
| To GenomeBrowser | scaffold197.1:342846..350170 |
| Genes list of scaffold | scaffold197.1 |
| Synonym | pfu_aug1.0_66817.1_13044 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_197.1_23654.t1 | 2 | 1 | NRDE | 1 | 241 | 0.0 | 208.1 | 0.0 | 0.0 | 178.7 |
| pfu_aug2.0_197.1_23654.t1 | 2 | 2 | NRDE | 244 | 298 | 0.0 | 208.1 | 1.8e-10 | 1.3e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_197.1_23654.t1 | gi|676435645|ref|XP_009047624.1| | hypothetical protein LOTGIDRAFT_200139 [Lottia gigantea] | 9.80909e-45 |
| pfu_aug2.0_197.1_23654.t1 | gi|241638382|ref|XP_002409106.1| | conserved hypothetical protein [Ixodes scapularis] | 2.0e-37 |
| pfu_aug2.0_197.1_23654.t1 | gi|585690567|ref|XP_006821090.1| | PREDICTED: transport and Golgi organization protein 2 homolog [Saccoglossus kowalevskii] | 9.0e-37 |
| pfu_aug2.0_197.1_23654.t1 | gi|585690571|ref|XP_006821091.1| | PREDICTED: transport and Golgi organization protein 2 homolog [Saccoglossus kowalevskii] | 4.0e-36 |
| pfu_aug2.0_197.1_23654.t1 | gi|383852607|ref|XP_003701818.1| | PREDICTED: transport and Golgi organization protein 2 homolog [Megachile rotundata] | 1.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_197.1_23654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23654.t1 atgtgtctgttgtatgtgtacgttaatgatgatccaaatgagagcaattatcgattgatactggccaataatagagacga atattgggacagaccaacaaaaccactggcacgcatatgtgatcatccaaactgctttagttcgcaggaccagcagccag ggagtgagggaggaacgtggctggcaatgtcaacaaacggaaaaataggtatcctcacaaatgtcttaggacagttgtca acagataaacaatccagagggaacctagtaaacgattacctaacgtcccagcagtcggggaaggattttattgatcaagt tgtagccccatgtaaggataggtacaatggattccatctgattttgctggatttaagtgagaagaaaaccagatttaaac atttttcaaacaaatgtgatgaagagggtctactagatagaggattttttgctgttggaaattccatcttaccttcaaaa ccatggagaaaatgtagaattggcaaggaaaattttgagtcaattgttaataaaagactaaaggagccatgcaataatga ggaattagtctctgatctacacaatcttatgtctgacccaatcagacatggcgtggatgaactgttacaggatcagggtc agtcagcaggaaaggatgaggagaccatgtctgatctcagtgctatatttgtaaattcacgacatacgcggtacggaacc agacatggcgtggatgaactgttacaggatcagggtcagtcagcaggaaaggatgaggagaccatgtctgatctcagtgc tatatttgtaaattcacgacatacgcggtacggaaccaggactcaatctttcattatggttgaccacagtgggcgttgtg aattccgtcagatgtgtcttgaaacaccggtggatcctgacaattttcagtggcggacagatgttcaacatttcaatata gacaagctgaataaattatga |
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Protein
| Protein ID | pfu_aug2.0_197.1_23654.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_197.1_23654.t1 MCLLYVYVNDDPNESNYRLILANNRDEYWDRPTKPLARICDHPNCFSSQDQQPGSEGGTWLAMSTNGKIGILTNVLGQLS TDKQSRGNLVNDYLTSQQSGKDFIDQVVAPCKDRYNGFHLILLDLSEKKTRFKHFSNKCDEEGLLDRGFFAVGNSILPSK PWRKCRIGKENFESIVNKRLKEPCNNEELVSDLHNLMSDPIRHGVDELLQDQGQSAGKDEETMSDLSAIFVNSRHTRYGT RHGVDELLQDQGQSAGKDEETMSDLSAIFVNSRHTRYGTRTQSFIMVDHSGRCEFRQMCLETPVDPDNFQWRTDVQHFNI DKLNKL |
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