Gene
| Gene Model ID | pfu_aug2.0_199.1_30393 |
|---|---|
| Locus | scaffold199.1 : 38646 ... 58942 : + |
| To GenomeBrowser | scaffold199.1:38646..58942 |
| Genes list of scaffold | scaffold199.1 |
| Synonym | pfu_aug1.0_23097.1_33319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_199.1_30393.t1 | 2 | 1 | Sec34 | 34 | 186 | 0.0 | 166.3 | 0.0 | 0.0 | 166.3 |
| pfu_aug2.0_199.1_30393.t1 | 2 | 2 | Sec34 | 592 | 616 | 0.0 | 166.3 | 0.63 | 3100.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_199.1_30393.t1 | gi|676453056|ref|XP_009053232.1| | hypothetical protein LOTGIDRAFT_116220 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_199.1_30393.t1 | gi|678002456|ref|XP_009078031.1| | PREDICTED: conserved oligomeric Golgi complex subunit 3, partial [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_199.1_30393.t1 | gi|512821776|ref|XP_002941013.2| | PREDICTED: conserved oligomeric Golgi complex subunit 3 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_199.1_30393.t1 | gi|701347613|ref|XP_009982880.1| | PREDICTED: conserved oligomeric Golgi complex subunit 3, partial [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_199.1_30393.t1 | gi|529428018|ref|XP_005233834.1| | PREDICTED: conserved oligomeric Golgi complex subunit 3 [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_199.1_30393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30393.t1 atgttccattatcaccaaagtcacctaccaatgccgagtcaatatcagaatacttccagaggagtggtctccctgcaaaa acagagactgctcagatgagaatacatagatgagctgaatggctataggcagcagtgtgacagtgttatggatgaggtga caggtgcactaacatacttatctaatctccacaaacagtatgttagcgtgtctacaaaaaccaatgccctccatgaggct tgtgaacatctgcttgcagaacagacacggttaatgaacacagcagagaccatcagtaataagttatcgtactacaatga gttggacaagatctctaataaattattatctcctaccttagcagtcaccaatgagtcatttgtcccgatgctgtccagac tggatgagtgtatactatatcttcagagtaatcctaactacaaagagtcccctgtgtatttagcacgattaaaccagtgt ctgtctaaagcacttaatctgataaaaagtcacgtgtccaatattctacagactgccaccaaacaagttttagaaaaaaa ggagacaagttctgcagatgacaatgcatttactttgttttatggaaaattccgagcttttgcacccagagtgaaggctc ttatggaacaactggagattagaactgataaaagtacagagtatagccaagtattggcagattgccagcagtgctacatc agtcagagggaaacgttactgagtcccagtataacatccaccataacagatctggcatccaaacattcacgtgaccactg tgctctgatgaggagtgggtgtgcctttatggtccatgtctgtgaggatgaataccagctttattataacttcttcactt cacattcacctatgttggagacatatatttatatcagatctgacattctacaatactctgcagctcagggcgatctggct tacccggagaagttagaaatgatggagagtatagcagagagtctgaagaacaagggtactatgaggagtaccccaggaca ttccagatcagcttctaatgcttctagcacaagtcaggaggtagcccaactcacagagagcatcaccgatatcacaaact cagagccagccatccagctaggtactagtatgcctatgtcaccagcagatcttcacggtatgtggtaccctactgtcagg agaacccttgttactctgtcaaaactctacaggtgtatagacaaaacaacatttcaaggattggcacaggaagctctcca atcttgtattgaatctcttaaagctgctaaaactggcatcactcaaagaaagacactacttgatggacagctttttatta taaagcacttgttgatattgagggaacagatagcaccatttcagagtgacttctctatcagggaaacctccttggatttc agcaaacttaaagatgctgcttatggtctcatacacagcaaggggaagctgtttgctctcaactccaacaactctttgct gcaattcattttagagggaaccccacaagtaacagagtactttgtggattctaagagagacgtggaccagcagctgaagt tgacatgtgaagaattcatacatcatttgtctggtttgtttacagagcctctcaaatcattcctatcaagggcaacaata gtaatacagatgaaggatcaggaggatgtgaagggcgtcaccctgaagcaacaaccttttgccacacccgaaaaagttca cgatgtagttgcagaaacgtacaaaaacatcaagagtaaactctccagtgtccataaaagcatggcactctacttggcta ataaagatactgaagtcatactcttcaagcctataaaggtgaacattcagcagagtttccagaatttatcggagatttta cagaatcattatacagaggaggaccgacacatagtagcatgtcctagtactgaacagataaacttgttgctggctaccac atcaaagtga |
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Protein
| Protein ID | pfu_aug2.0_199.1_30393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30393.t1 MFHYHQSHLPMPSQYQNTSRGVVSLQKQRLLRXEYIDELNGYRQQCDSVMDEVTGALTYLSNLHKQYVSVSTKTNALHEA CEHLLAEQTRLMNTAETISNKLSYYNELDKISNKLLSPTLAVTNESFVPMLSRLDECILYLQSNPNYKESPVYLARLNQC LSKALNLIKSHVSNILQTATKQVLEKKETSSADDNAFTLFYGKFRAFAPRVKALMEQLEIRTDKSTEYSQVLADCQQCYI SQRETLLSPSITSTITDLASKHSRDHCALMRSGCAFMVHVCEDEYQLYYNFFTSHSPMLETYIYIRSDILQYSAAQGDLA YPEKLEMMESIAESLKNKGTMRSTPGHSRSASNASSTSQEVAQLTESITDITNSEPAIQLGTSMPMSPADLHGMWYPTVR RTLVTLSKLYRCIDKTTFQGLAQEALQSCIESLKAAKTGITQRKTLLDGQLFIIKHLLILREQIAPFQSDFSIRETSLDF SKLKDAAYGLIHSKGKLFALNSNNSLLQFILEGTPQVTEYFVDSKRDVDQQLKLTCEEFIHHLSGLFTEPLKSFLSRATI VIQMKDQEDVKGVTLKQQPFATPEKVHDVVAETYKNIKSKLSSVHKSMALYLANKDTEVILFKPIKVNIQQSFQNLSEIL QNHYTEEDRHIVACPSTEQINLLLATTSK |
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