Gene
| Gene Model ID | pfu_aug2.0_199.1_30405 |
|---|---|
| Locus | scaffold199.1 : 168156 ... 169425 : - |
| To GenomeBrowser | scaffold199.1:168156..169425 |
| Genes list of scaffold | scaffold199.1 |
| Synonym | pfu_aug1.0_3551.1_23358 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_199.1_30405.t1 | 1 | 1 | Zip | 6 | 299 | 0.0 | 204.5 | 0.0 | 0.0 | 204.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_199.1_30405.t1 | gi|260822322|ref|XP_002606551.1| | hypothetical protein BRAFLDRAFT_247429 [Branchiostoma floridae] | 4.06377e-44 |
| pfu_aug2.0_199.1_30405.t1 | gi|260821920|ref|XP_002606351.1| | hypothetical protein BRAFLDRAFT_118511 [Branchiostoma floridae] | 6.02558e-44 |
Transcript
| Transcript ID | pfu_aug2.0_199.1_30405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30405.t1 atgttgtttgttccaaaaatatcgtctatggtcttactgtttgtaggtacgttaggattcggactactaccttttctttt atccaaatgcttgaagaaaaagaaaatttcatctgaaaagtacgaaaaaatcatcggctatctgaattcttttgccggag gtgtttttctagggacatcagtgcttcatctgttaccggaagcagtagaagaattcgaacacgacgttagctatgagtac ccaatcgcggaagcaatcacgtgtgctggttttttgttggttatgttcttggagcaagccatgatatattgctctagtgc ggattcaagtctccatcgttctcatggacatgataacaagagtatgcaaaatgatgaaagtccaaacgaagtgaagaacc aaaacgtttttagcattgaatcatcacaaaatccggacgcatcagagaaaagaaccgataaaaaatcccgttttcgttct ttgattgtaattttggcattgtcattacatgtgatatttgaaggaatcgtagtagggacccagaatagcgaggatgacgt gtggattttacttggtattctgtctctccataagtgtatcgtagctttcagcgtgggcatcaatatagaactcaatatat cgtcgtttaagaaagcatttgcagctttgtttgtattttctatcatagcacccattggcgtcgccatcggaatagttgtc acagagacaggaaccggaaattctcacgggatagcagccggggttttacaaagtctggctaccggaacttttctgtacgt taccttcttcgagatgttacaaaaagaagttggtcatggaaagtcgattttgaaagtaatatgtgtaacaatcggtttcc tcgtcattgtaggaatccagtttctacctgataaggactga |
|
Protein
| Protein ID | pfu_aug2.0_199.1_30405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30405.t1 MLFVPKISSMVLLFVGTLGFGLLPFLLSKCLKKKKISSEKYEKIIGYLNSFAGGVFLGTSVLHLLPEAVEEFEHDVSYEY PIAEAITCAGFLLVMFLEQAMIYCSSADSSLHRSHGHDNKSMQNDESPNEVKNQNVFSIESSQNPDASEKRTDKKSRFRS LIVILALSLHVIFEGIVVGTQNSEDDVWILLGILSLHKCIVAFSVGINIELNISSFKKAFAALFVFSIIAPIGVAIGIVV TETGTGNSHGIAAGVLQSLATGTFLYVTFFEMLQKEVGHGKSILKVICVTIGFLVIVGIQFLPDKD |
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