Gene
| Gene Model ID | pfu_aug2.0_199.1_30410 |
|---|---|
| Locus | scaffold199.1 : 234358 ... 267254 : - |
| To GenomeBrowser | scaffold199.1:234358..267254 |
| Genes list of scaffold | scaffold199.1 |
| Synonym | pfu_aug1.0_2335.1_30062 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_199.1_30410.t1 | 5 | 1 | zf-C2H2_4 | 399 | 420 | 3.9e-07 | 29.9 | 0.0006 | 1.5 | 9.3 |
| pfu_aug2.0_199.1_30410.t1 | 5 | 2 | zf-C2H2_4 | 425 | 445 | 3.9e-07 | 29.9 | 0.00066 | 1.6 | 9.2 |
| pfu_aug2.0_199.1_30410.t1 | 5 | 3 | zf-C2H2_4 | 744 | 765 | 3.9e-07 | 29.9 | 0.00023 | 0.57 | 10.6 |
| pfu_aug2.0_199.1_30410.t1 | 5 | 4 | zf-C2H2_4 | 865 | 886 | 3.9e-07 | 29.9 | 0.0016 | 4.0 | 7.9 |
| pfu_aug2.0_199.1_30410.t1 | 5 | 5 | zf-C2H2_4 | 891 | 911 | 3.9e-07 | 29.9 | 0.0019 | 4.8 | 7.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_199.1_30410.t1 | gi|632950545|ref|XP_007890781.1| | PREDICTED: zinc finger protein basonuclin-2 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_199.1_30410.t1 | gi|632950543|ref|XP_007890780.1| | PREDICTED: zinc finger protein basonuclin-2 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_199.1_30410.t1 | gi|328715809|ref|XP_003245736.1| | PREDICTED: zinc finger protein basonuclin-2-like isoform X1 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_199.1_30410.t1 | gi|641669493|ref|XP_008184841.1| | PREDICTED: zinc finger protein basonuclin-2-like isoform X2 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_199.1_30410.t1 | gi|170295821|ref|NP_001116227.1| | zinc finger protein basonuclin-2 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_199.1_30410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30410.t1 atgaagccattggaggcgattcgctgtacactgccaaactgtccttgtgaatgtttctcacctggtaaggtttacctgag aagttgtgactcttgcaaacacggctgggtggcccacgcactagataagctgggataccgccacatctataacctgggga tgtcagtggaggtcgtacaacctaacattgtctttgacatagctagcctgatgttgtatgggacacatgccacgcccatc cgcctcaagatcctcctggatcgcctattcagcgtcttgcaacatgacgaggtgctgcagatactacagggatttgggtg gacctatgaggactacgccagaggctacattctacaggattccaatggtcaagtactggacaagtggacaatagccaccc gggaggaggagcacgtcatattacaacagtttctgaggttcggagagacaaagtcaatagcacaggaaatcattctacag gataccaaggaccaacaggaaatgttccttaaacacaccggcaggtcagactcggaaataaagaagtttatcgagcgcaa caaccacacaatgcagtcatacatgagaacactagagtccagacatttatttggaagcagaattccgtttgtaccaatcc cggggagaatgttaagtccaggttcgcttgcatgtttttcgccgccaacatcagcatcacgtgacttgcggccacctttg gttgctacaggacttggcgcttcaagtcctggttccacgtcaccgctagggagactacagaccatgcagccgtttgaatt cagaagagaccacagtccagcaccaagtcccgaaacagccgagaaaaacttgaccgaatcatccccatgtggaagtccac agaacctgagttccactccaacctcatcacaatcgattactccgccattcacaccgattaaaagttcagaaagtcgtgat catctcagtccaaatcctatgactcttcccatcatgccacctcaagatgatcacgtgaccagagctctagacttcacgac cgggaaagagcccagtcattcaccaagctccattttctctgatagaaaactcaaacatttaagaaaatcaagcaacccca tcaaaagacattggaatccctctccaggattcggaagtactttggttggaccaaatgggaaaaagcgagtattatgtaca gcatgcaataaaacattctgtgataaaggtgctctaaaaatccattacagtgctgtacatctgaaggaaatgcataaatg tacagtagaaggatgcaacatgatgttcagttcacgccgtagcagaaaccgccatagcgctaatccgaatcctaagttac atatgcctcagaaaagggtgaaattaccagatggagcatccttgattgacgatggttcagataagtcaaaccgtatgagg gcgggcagtcctcctcctaccatggtgatgcctcccactctcggaccacacgggactattcctcctttagacgctcagga tctccaccccgcaagtcaagctacattctacgctgaaatgaatgcacaaatgtccatgttcccgacccccgaaaaacgaa tcaagctggaccaaggtgatgacggaccaaaagaccttagtatgccacccaggagggaaattgaaacaaagtttgacaat ggaatggccaaagatgatataaaatctgactcgccggttagtcaaagaagcatgagtcggaggaagaacaatattccaac aagactagctccttctgaggaagaaaacaatgtgctaagtgatgaagaaaaggatggtgaactcaaaattgacactaaat attccagaaggcgaagcagaattgcagaggccggagcaatggatggtttagatgtagacgataagctgagggcgtcgtct cagaggtattatttgaatctatctatgtcagatgatgacagaatggagtcgtcgagtgatgtgagcgagggtttcaaaag cgttggtttacctagaaaagactttcctaaaatcgcctcccttttgtcaagatcaggagtgaaggatttgacaagccaag aagccattgattacacaacaaaattcaaggagaggaaagtcgactacccaccaagccctgggtcgacttctgattccgat gatggcagcaatcatgtgggtttgtctaatggatgcactctcaaaaacgatcgaattgaccctgacacttgttctgtatg tggagaggtatttcagaatgctaaagaccttgatattcatttcaaaactgatcatttgaatcatactagcaaggaagcca tattgaatgatgcattaaatctcagacgcagaaacgtagattctggaaatgaaagtcatgaggacatgtcatcagacgaa gaaaactttccagacaacgatgtcggaaacgttcagcaagcagacgataacgacactgaggatgaagaaaatcactgtcc actgaacggaaacaagtgtcacgcggaggaagacagcgacgacgacgacgatatgcctcaagggaaagaactgaatgaaa tatgtctggaagagaatgaaatttctgtcttttgccatatctgtcaatccaagttcaaggataatctcgctttgaaggaa cattttgagatgcaccacccaaaagaaacgtttaactgtacagtgacaggctgcgagaaaatcttctcgaccagaaagag caggaatcgccatagtcagaatgataacttacacagacacctcgcttccggcagacaaaatggcgtgtcatag |
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Protein
| Protein ID | pfu_aug2.0_199.1_30410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_199.1_30410.t1 MKPLEAIRCTLPNCPCECFSPGKVYLRSCDSCKHGWVAHALDKLGYRHIYNLGMSVEVVQPNIVFDIASLMLYGTHATPI RLKILLDRLFSVLQHDEVLQILQGFGWTYEDYARGYILQDSNGQVLDKWTIATREEEHVILQQFLRFGETKSIAQEIILQ DTKDQQEMFLKHTGRSDSEIKKFIERNNHTMQSYMRTLESRHLFGSRIPFVPIPGRMLSPGSLACFSPPTSASRDLRPPL VATGLGASSPGSTSPLGRLQTMQPFEFRRDHSPAPSPETAEKNLTESSPCGSPQNLSSTPTSSQSITPPFTPIKSSESRD HLSPNPMTLPIMPPQDDHVTRALDFTTGKEPSHSPSSIFSDRKLKHLRKSSNPIKRHWNPSPGFGSTLVGPNGKKRVLCT ACNKTFCDKGALKIHYSAVHLKEMHKCTVEGCNMMFSSRRSRNRHSANPNPKLHMPQKRVKLPDGASLIDDGSDKSNRMR AGSPPPTMVMPPTLGPHGTIPPLDAQDLHPASQATFYAEMNAQMSMFPTPEKRIKLDQGDDGPKDLSMPPRREIETKFDN GMAKDDIKSDSPVSQRSMSRRKNNIPTRLAPSEEENNVLSDEEKDGELKIDTKYSRRRSRIAEAGAMDGLDVDDKLRASS QRYYLNLSMSDDDRMESSSDVSEGFKSVGLPRKDFPKIASLLSRSGVKDLTSQEAIDYTTKFKERKVDYPPSPGSTSDSD DGSNHVGLSNGCTLKNDRIDPDTCSVCGEVFQNAKDLDIHFKTDHLNHTSKEAILNDALNLRRRNVDSGNESHEDMSSDE ENFPDNDVGNVQQADDNDTEDEENHCPLNGNKCHAEEDSDDDDDMPQGKELNEICLEENEISVFCHICQSKFKDNLALKE HFEMHHPKETFNCTVTGCEKIFSTRKSRNRHSQNDNLHRHLASGRQNGVS |
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