Gene
| Gene Model ID | pfu_aug2.0_1994.1_15342 |
|---|---|
| Locus | scaffold1994.1 : 9141 ... 64355 : - |
| To GenomeBrowser | scaffold1994.1:9141..64355 |
| Genes list of scaffold | scaffold1994.1 |
| Synonym | pfu_aug1.0_12662.1_61079 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neurogenic locus notch | GO:0007417 GO:0009653 GO:0022008 GO:0045596 GO:0048468 GO:0048513 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1994.1_15342.t1 | 1 | 1 | Astacin | 196 | 368 | 4.9e-38 | 130.4 | 4.10006e-41 | 1.0e-37 | 129.3 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 1 | EGF_2 | 375 | 400 | 6.0e-18 | 64.7 | 0.13 | 330.0 | 1.5 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 1 | EGF | 377 | 397 | 0.0 | 199.4 | 0.51 | 1300.0 | -0.5 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 2 | EGF | 460 | 490 | 0.0 | 199.4 | 6.9e-07 | 0.0017 | 18.2 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 2 | EGF_2 | 460 | 491 | 6.0e-18 | 64.7 | 0.022 | 54.0 | 4.0 |
| pfu_aug2.0_1994.1_15342.t1 | 4 | 1 | MAM | 502 | 564 | 0.0 | 324.1 | 4.1e-10 | 1.0e-06 | 28.6 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 3 | EGF | 585 | 616 | 0.0 | 199.4 | 0.00015 | 0.36 | 10.8 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 3 | EGF_2 | 585 | 619 | 6.0e-18 | 64.7 | 0.00012 | 0.3 | 11.2 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 4 | EGF | 630 | 662 | 0.0 | 199.4 | 9.5e-09 | 2.4e-05 | 24.2 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 4 | EGF_2 | 630 | 664 | 6.0e-18 | 64.7 | 9.3e-06 | 0.023 | 14.8 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 5 | EGF | 673 | 704 | 0.0 | 199.4 | 8.9e-05 | 0.22 | 11.5 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 5 | EGF_2 | 677 | 707 | 6.0e-18 | 64.7 | 0.00041 | 1.0 | 9.5 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 6 | EGF | 718 | 750 | 0.0 | 199.4 | 2.5e-09 | 6.2e-06 | 26.0 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 6 | EGF_2 | 718 | 752 | 6.0e-18 | 64.7 | 1.5e-05 | 0.036 | 14.2 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 7 | EGF | 761 | 792 | 0.0 | 199.4 | 1.9e-05 | 0.047 | 13.6 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 7 | EGF_2 | 761 | 795 | 6.0e-18 | 64.7 | 6.7e-05 | 0.17 | 12.1 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 8 | EGF | 804 | 834 | 0.0 | 199.4 | 3.4e-06 | 0.0084 | 16.0 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 8 | EGF_2 | 804 | 836 | 6.0e-18 | 64.7 | 0.00013 | 0.32 | 11.2 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 9 | EGF | 845 | 878 | 0.0 | 199.4 | 4.3e-07 | 0.0011 | 18.9 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 9 | EGF_2 | 845 | 879 | 6.0e-18 | 64.7 | 1.4e-05 | 0.034 | 14.3 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 10 | EGF | 888 | 919 | 0.0 | 199.4 | 1.2e-07 | 0.00029 | 20.7 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 10 | EGF_2 | 888 | 922 | 6.0e-18 | 64.7 | 0.00095 | 2.4 | 8.4 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 11 | EGF | 931 | 965 | 0.0 | 199.4 | 8.1e-06 | 0.02 | 14.8 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 11 | EGF_2 | 931 | 966 | 6.0e-18 | 64.7 | 0.00013 | 0.32 | 11.1 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 12 | EGF | 976 | 1008 | 0.0 | 199.4 | 1.0e-06 | 0.0025 | 17.7 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 12 | EGF_2 | 979 | 1010 | 6.0e-18 | 64.7 | 0.0027 | 6.7 | 6.9 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 13 | EGF | 1035 | 1051 | 0.0 | 199.4 | 8.5e-05 | 0.21 | 11.5 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 13 | EGF_2 | 1042 | 1053 | 6.0e-18 | 64.7 | 0.054 | 130.0 | 2.8 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 14 | EGF | 1060 | 1093 | 0.0 | 199.4 | 3.0e-06 | 0.0073 | 16.2 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 14 | EGF_2 | 1060 | 1094 | 6.0e-18 | 64.7 | 0.00013 | 0.33 | 11.1 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 15 | EGF | 1096 | 1127 | 0.0 | 199.4 | 9.2e-07 | 0.0023 | 17.8 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 15 | EGF_2 | 1096 | 1130 | 6.0e-18 | 64.7 | 0.00096 | 2.4 | 8.4 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 16 | EGF | 1139 | 1172 | 0.0 | 199.4 | 1.1e-08 | 2.8e-05 | 23.9 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 16 | EGF_2 | 1139 | 1173 | 6.0e-18 | 64.7 | 9.1e-05 | 0.22 | 11.6 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 17 | EGF | 1182 | 1213 | 0.0 | 199.4 | 4.1e-06 | 0.01 | 15.7 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 17 | EGF_2 | 1182 | 1216 | 6.0e-18 | 64.7 | 0.00074 | 1.8 | 8.7 |
| pfu_aug2.0_1994.1_15342.t1 | 18 | 18 | EGF | 1225 | 1256 | 0.0 | 199.4 | 1.8e-10 | 4.4e-07 | 29.7 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 18 | EGF_2 | 1225 | 1259 | 6.0e-18 | 64.7 | 4.0e-06 | 0.0099 | 16.0 |
| pfu_aug2.0_1994.1_15342.t1 | 4 | 2 | MAM | 1273 | 1442 | 0.0 | 324.1 | 1.1e-27 | 2.6e-24 | 85.7 |
| pfu_aug2.0_1994.1_15342.t1 | 4 | 3 | MAM | 1483 | 1634 | 0.0 | 324.1 | 6.8e-39 | 1.7e-35 | 122.1 |
| pfu_aug2.0_1994.1_15342.t1 | 19 | 19 | EGF_2 | 1630 | 1634 | 6.0e-18 | 64.7 | 4.7 | 12000.0 | -3.4 |
| pfu_aug2.0_1994.1_15342.t1 | 4 | 4 | MAM | 1646 | 1774 | 0.0 | 324.1 | 1.6e-26 | 4.0e-23 | 81.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1994.1_15342.t1 | gi|260819784|ref|XP_002605216.1| | hypothetical protein BRAFLDRAFT_80843 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1994.1_15342.t1 | gi|390343535|ref|XP_798028.3| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1994.1_15342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1994.1_15342.t1 atggcatcaatcaatagaggagtgaagcaacatctttatgagcgagcagtaggtggcggcaaagtgcgcgtgctggttgg cggtatgaagtcgctctgggttgttgtgttggtgttatttgtcttttcttgtatacattacagtaatggtaataatgtac tgaccaaagaggaggcccgagataaattgacctcactagtggacagacatgtgagagatgttatacacactgctcgcaag gagaagatgtctgaccttgaaagattcttcaaatcaatgaagaggtcaaataagaagacaagacggagattcggaaaaga gcgacgtgagtatggtgtatctgaaggtcaaggtggagcagcattggattctactatacagaacatacctgccccatatt ctgagatggcatcgctactggggagtatggttatacagcatatggatagattcggacatgccgcagaaccccatcaaccc tttggaatggatggtattcatcggaagaaatcacatgatgatagcctggatacacacaaactgactcatcaacagaaagt ggctctggggatcccccgatatgtcaaaataatagaggatgctgcagaaatgttttccaacttgacttgtttgaaatggg tgaagcgtgatgatcctcgggcacagaacctcggccatacttcttacatctcattctttagtgaaagtggttgttggtcc tatgtgggtaaagtgttctcaaacaaacaacagataagtttacaagctccttggtgtgtaacattaccgataacgatcca tgagatgtgtcacgccattggtcagatgcacgagcagtcacgtactgacagagataattacgtcaccatgctgtggcaga atatacgaggtggtcgtggtaacaataacatggctaaatcatcaaccttagacaataacccgtatgattatgaatctgtc ctacagtatggcctgtattccttttcttccaatggtagaccttctatggagctaacagacagacgtctagatttcctggc tgactcagccacaggactaatgttctatgatgtacaggatgttatagatgcctaccaatgtaccaagcaatgtaccacac tgcctttgtgccagaatggaggttttgtgaaccatagatgtgaatgcttctgtccatcgggacttacagggaatttatgc cagtccacaatctctacacagcctagtaaacgatgtggtgtggtgaaaggcataacatacagaactaccaaagacgggaa ctccaacataatgttgctgaagtttgacagtgctttcgcagctgatagaccagcaggaaagggctttaaactatcactgc aagctgtaggaccaggttgttccaccaatccatgtatgtttgggaactgtatggaagcagatggtgggtcatacacctgt aattgtgactccggatggcagggaaggaactgtgacactccagatggcagcttgactctgacatgtggctttgaaccagg atcagtttgttttatggacaacatggatggtgatgactttgactggacaatacattcgggtcctacaccatctaaaaaca ctggaccatcagctgccaaggacggcattaattacctgtacactgaaatgtcctcccctcagaaagacggtgacactgct agatatgaaaccatggtcaatttacaaggttggagcggattatactgtgaaatgcctataaccagcgatccgtgcatgcc taatccatgtatgaacaatggatcttgctatttagatctgaattcattgacaggatcttcctgtctttgtccaccggatt ggagtgggtattactgtgaaatgccaacaaccaatacaacacatgtttgtagtccaaatccctgtatgaacaatggtact tgctacactgacccagtgtcaactgtgggattctcctgttactgtctgccaggttggagcggattatactgtgaaatgcc tataaccactgatccatgcatccctaatccgtgtatgaacaatggatcatgctattcagatccaaattcattgacaggat cttcctgtttttgcccaccagattggagcgggttttactgcgaaatgccaacaaccaatacaacacatgtttgtagtcca aatccttgtatgaacaatggtacatgctacactgacccagtgtcaacagtcggattctcctgttcctgtctgccaggttg gagcggattatactgtgaaatgccactgaatccaggtaagtgcttctcaagtgcctgcctaaacaatggtacatgttatg acgatccaaattcacaaaatggccattactgcgtctgtacgcatggatggactggaacatactgtgaaattccagtaact accggtctatgtttctccaatgcctgcatgaatgggggtacatgttatgatgatccacagaatggttatttctgcgtgtg ttcacatgcttggacagggttatactgtgaaattccagttactactggttcttgtttttcaaatgcctgcatgaataatg gtacatgctacgacgatccaaattcaccaaacggttattattgctattgcccacatggttggacagggatacactgtgaa tttcctgttgctcctgtaccatgtctctcaaatatctgcatgaataacggtacatgctttgatgatcaaaattctccaaa cagctattactgccactgtacgcctggatggacagggttcaattgtgaaattcctgttactactggcttgtgtttctcaa atgcctgtttgaataatggtacatgctatgacgatccaaatacaccaaatggtaattattactgcatctgtacacatgct tggacaggttctcactgtgagataccaatgacgcctacagacccttgctattataatccctgtgtgaacaacgccacttg tcgtgtcgatgcaacaagagctaatggctttgtatgtttatgtttacccagatggagcggtttatactgtgaattatcac aaataggctcatgtgcattacatgcctgcatgaataatgctacctattacaatgatacattatattcaccaagtggttat tactgtagctgtacaattggttggtcgggatcttattgtgagattcctataactccatgtcagtcaaatgcctgtatgaa taacggcacatgttacgatgatcagtattctatcactggttattactgccactgtgggcctagttggacaggaatacact gcccatgtgcctcaaatgcgtgtatgaataacgctacgtgttatgaaactccaaatatggcaaatggatattactgcttg tgtgagtatggatggactggaacgtactgtgaatatcccgtaactactggtttgtgtctgtcaaattcctgcatgaataa cggtacttgttatgacaatacaacttcagccgatggatatatgtgcctatgtgcacaaggatggactggaaaaaattgtg aaattgccatcactactagtttgtgtccatcagatgcctgtatgaataatggtacatgtcacaaggatgataattcagtc attggatattactgctcgtgtgcgcatggatgggctggattttactgccaaacatcaattactaaccacccttgtctatc caacccttgcatgaataacggaacatgtgacgacaatccttatgtactaagtggttactcttgctcctgtgcgtctggtt ggacaggtactcagtgtgaaagccccataacacctacagttgataccaagctgaattgcgcagttgaagatggacaacca tgcttcctcaagagaatgaccgacaaggatttcatgtggaaaaaaggaaaaaatcattcacttgatattaaccttttcta ctttcgcaatcggccttttagcaagcaagttaaccctttcgctgccaaaataggagctcatggcggtgagagatattatt atatagagacatcgtcgccaaggaaacgaggggatgaggcgtggctcaagtcctctgagctttactcagattttgaaatg tgtttgacgtttttctaccatgcatatggtcttggtgtgggctccctcattgtttactacgcatacggacaaggacctca ggaaatatggaggatagatggagatcagggaaatgcatggcacaaggtcaacctaagactcgcaccaaaaccatggtcca aggtctacttcagtggtgtacgtggacgttcatacacgggtgatatagcaatagatgatatatctgtcataaagggtccc tgtgacggactcactccaaccattcatcccaaccccactacagatccaggtaatatgaaatgctcgtttgagaaggatac atcctgcttcctgaaaaattctgcagatgttgattcaaatatgcattgcggatttgaacaggatacatgtcagtttcatc aaagtacatacgacgattttgattggacaagaaaatctggacgtaccagaacatcaggaacggggcctggaagagccagt aatggtgaatactatctttacatcgagtcatcaaacagaaagaagggagagaaggcagtattggaatcgtatagtaaaat aatggggtctaactgtgtagtcatggagtatcatatgtttggaaaaaatgttggagaacttaacatcagtatttcaaatg acacaagcagaccaattgctctttggactcgcaaagggagtttgggtaattcctggaagacaggagctgttcaaataaac tcccctacaccatacagaattcttgtatcagccagtgttggttccttaggcagtggggacatagccatagatgacttaga ggtcatacagggaacttgtgaccagcacacagtcgtaagacaggtcctcttccgccacatgatgaccagcacacccagtc gtaagacaggtcctcctcagccacatgatggtcagtttgcttacatcgaggcatcacatccacgtaggagagatgatgag gccatcttaacatctaaagacacaaacataccaccaggtgactactgtctgcagttcttatacaacatgtacggtcaaag aatgggaagtctgagtgttgtgttaggaacatctggtaaggagttatggagggatgaaggggatcaaggaacagactggc acttgactagagtggacataccctttactgctaacgaagagttagagataattgctgaaaggggtcgatcctacaagagt gacgctgctattgatgacgttatattgtctccaggtcaatgtatccataactccattagataa |
|
Protein
| Protein ID | pfu_aug2.0_1994.1_15342.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1994.1_15342.t1 MASINRGVKQHLYERAVGGGKVRVLVGGMKSLWVVVLVLFVFSCIHYSNGNNVLTKEEARDKLTSLVDRHVRDVIHTARK EKMSDLERFFKSMKRSNKKTRRRFGKERREYGVSEGQGGAALDSTIQNIPAPYSEMASLLGSMVIQHMDRFGHAAEPHQP FGMDGIHRKKSHDDSLDTHKLTHQQKVALGIPRYVKIIEDAAEMFSNLTCLKWVKRDDPRAQNLGHTSYISFFSESGCWS YVGKVFSNKQQISLQAPWCVTLPITIHEMCHAIGQMHEQSRTDRDNYVTMLWQNIRGGRGNNNMAKSSTLDNNPYDYESV LQYGLYSFSSNGRPSMELTDRRLDFLADSATGLMFYDVQDVIDAYQCTKQCTTLPLCQNGGFVNHRCECFCPSGLTGNLC QSTISTQPSKRCGVVKGITYRTTKDGNSNIMLLKFDSAFAADRPAGKGFKLSLQAVGPGCSTNPCMFGNCMEADGGSYTC NCDSGWQGRNCDTPDGSLTLTCGFEPGSVCFMDNMDGDDFDWTIHSGPTPSKNTGPSAAKDGINYLYTEMSSPQKDGDTA RYETMVNLQGWSGLYCEMPITSDPCMPNPCMNNGSCYLDLNSLTGSSCLCPPDWSGYYCEMPTTNTTHVCSPNPCMNNGT CYTDPVSTVGFSCYCLPGWSGLYCEMPITTDPCIPNPCMNNGSCYSDPNSLTGSSCFCPPDWSGFYCEMPTTNTTHVCSP NPCMNNGTCYTDPVSTVGFSCSCLPGWSGLYCEMPLNPGKCFSSACLNNGTCYDDPNSQNGHYCVCTHGWTGTYCEIPVT TGLCFSNACMNGGTCYDDPQNGYFCVCSHAWTGLYCEIPVTTGSCFSNACMNNGTCYDDPNSPNGYYCYCPHGWTGIHCE FPVAPVPCLSNICMNNGTCFDDQNSPNSYYCHCTPGWTGFNCEIPVTTGLCFSNACLNNGTCYDDPNTPNGNYYCICTHA WTGSHCEIPMTPTDPCYYNPCVNNATCRVDATRANGFVCLCLPRWSGLYCELSQIGSCALHACMNNATYYNDTLYSPSGY YCSCTIGWSGSYCEIPITPCQSNACMNNGTCYDDQYSITGYYCHCGPSWTGIHCPCASNACMNNATCYETPNMANGYYCL CEYGWTGTYCEYPVTTGLCLSNSCMNNGTCYDNTTSADGYMCLCAQGWTGKNCEIAITTSLCPSDACMNNGTCHKDDNSV IGYYCSCAHGWAGFYCQTSITNHPCLSNPCMNNGTCDDNPYVLSGYSCSCASGWTGTQCESPITPTVDTKLNCAVEDGQP CFLKRMTDKDFMWKKGKNHSLDINLFYFRNRPFSKQVNPFAAKIGAHGGERYYYIETSSPRKRGDEAWLKSSELYSDFEM CLTFFYHAYGLGVGSLIVYYAYGQGPQEIWRIDGDQGNAWHKVNLRLAPKPWSKVYFSGVRGRSYTGDIAIDDISVIKGP CDGLTPTIHPNPTTDPGNMKCSFEKDTSCFLKNSADVDSNMHCGFEQDTCQFHQSTYDDFDWTRKSGRTRTSGTGPGRAS NGEYYLYIESSNRKKGEKAVLESYSKIMGSNCVVMEYHMFGKNVGELNISISNDTSRPIALWTRKGSLGNSWKTGAVQIN SPTPYRILVSASVGSLGSGDIAIDDLEVIQGTCDQHTVVRQVLFRHMMTSTPSRKTGPPQPHDGQFAYIEASHPRRRDDE AILTSKDTNIPPGDYCLQFLYNMYGQRMGSLSVVLGTSGKELWRDEGDQGTDWHLTRVDIPFTANEELEIIAERGRSYKS DAAIDDVILSPGQCIHNSIR |
|