Gene
Gene Model ID | pfu_aug2.0_1994.1_15344 |
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Locus | scaffold1994.1 : 92646 ... 104440 : + |
To GenomeBrowser | scaffold1994.1:92646..104440 |
Genes list of scaffold | scaffold1994.1 |
Synonym | pfu_aug1.0_13490.1_10611 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1994.1_15344.t1 | 1 | 1 | SAND | 25 | 95 | 7.1e-23 | 80.1 | 3.9e-26 | 1.5e-22 | 79.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1994.1_15344.t1 | gi|742117153|ref|XP_010874071.1| | PREDICTED: glucocorticoid modulatory element-binding protein 2 [Esox lucius] | 7.0e-26 |
pfu_aug2.0_1994.1_15344.t1 | gi|597742778|ref|XP_007233487.1| | PREDICTED: glucocorticoid modulatory element-binding protein 2-like isoform X1 [Astyanax mexicanus] | 8.0e-25 |
pfu_aug2.0_1994.1_15344.t1 | gi|632939380|ref|XP_007909839.1| | PREDICTED: glucocorticoid modulatory element-binding protein 2 isoform X1 [Callorhinchus milii] | 1.0e-24 |
pfu_aug2.0_1994.1_15344.t1 | gi|632939384|ref|XP_007909853.1| | PREDICTED: glucocorticoid modulatory element-binding protein 2 isoform X3 [Callorhinchus milii] | 1.0e-24 |
pfu_aug2.0_1994.1_15344.t1 | gi|632939382|ref|XP_007909844.1| | PREDICTED: glucocorticoid modulatory element-binding protein 2 isoform X2 [Callorhinchus milii] | 2.0e-24 |
Transcript
Transcript ID | pfu_aug2.0_1994.1_15344.t1 |
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Definition | - |
>pfu_aug2.0_1994.1_15344.t1 atggagggagaagaagtttaccacagaggaggattcaaactgaagaaacctttacctaccctccctagtggtaagttaat tgatgtcacttgtggaaacctgaaaggtcttcttcatcgagagctcttcttgtgcccaggtatcagaagggaatgtatcg aatttgatggggaatttgtcacaccaaagaagtttatgtttatgggagagaaagctagactcaaagactggaaaaatgcc gtaaggattcaaggagttcaagtcagacagagtgttaagggcggggagcacgtggtatgggacggtagtacttatccaca ggaggaggacattgaggatgtcaagccagatatccaacagctacagttacagatgctaggtaatgtgagccaggctcaga aacaaatacagagcacgctagccaccgcagccatcaaacaggtgccccttgtaccagtggctccatctacaatggtgtcg tatcccgaaaaccagatggagacaactgatgaagaggataggctgttatggaaaggtattgtagagcttggcctagtgga tgagtttttccgtgaaatcaaggcatcgttagatatacttaagaacaacatggtgcggagaatggttcctttagaggaca ccaagaagatatctgtgattgtaaagcagttaggactaatgtcaaagctcaagtacaaattagaggctcaccagacggac atggagagacagcgacttagactagatagggagatggaagaactccagagaaaggtcagagaatacgaattgaagaaaga gatgctcaaaaggaaatccgactgtttcaatcagttaatagacatggctaagaaagagcaagatttcatgcctgaatcca aacgactttgctcaaatggtccctctgaaattgtgttcccttcatcattccctgtcagaaacacagcatccgatagagga gctgcatctgacagctctaacgacacaaattctaacacctctagatccacccctacagagtctcgccgtaaacagaaaac taccgagaaaatagtcccaaattattccagtgaaagagacagtattgagctggagtacgtaaacggtcatgattatgtag acgatattgaagaggaggaggaggatcctatcagcaccagtatatcatcatatcacgaatgtgtcccgagcagaaatgca cgtaaagcgtcactgagggaagaaaccaagaaagatttatcagaagataagagtaatagagaggttgatgaagcaggaca aggtgacatgaatagcaatgcaaccgataatgaaggcgtggggcaaggggatatgaatggcaacacaacagttatcgagg aaaaaccacgcccctccggccctgctacaagagtaagaaaaccaggtcgtcctagaaagtctgtcaatgaataa |
Protein
Protein ID | pfu_aug2.0_1994.1_15344.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1994.1_15344.t1 MEGEEVYHRGGFKLKKPLPTLPSGKLIDVTCGNLKGLLHRELFLCPGIRRECIEFDGEFVTPKKFMFMGEKARLKDWKNA VRIQGVQVRQSVKGGEHVVWDGSTYPQEEDIEDVKPDIQQLQLQMLGNVSQAQKQIQSTLATAAIKQVPLVPVAPSTMVS YPENQMETTDEEDRLLWKGIVELGLVDEFFREIKASLDILKNNMVRRMVPLEDTKKISVIVKQLGLMSKLKYKLEAHQTD MERQRLRLDREMEELQRKVREYELKKEMLKRKSDCFNQLIDMAKKEQDFMPESKRLCSNGPSEIVFPSSFPVRNTASDRG AASDSSNDTNSNTSRSTPTESRRKQKTTEKIVPNYSSERDSIELEYVNGHDYVDDIEEEEEDPISTSISSYHECVPSRNA RKASLREETKKDLSEDKSNREVDEAGQGDMNSNATDNEGVGQGDMNGNTTVIEEKPRPSGPATRVRKPGRPRKSVNE |