Gene
| Gene Model ID | pfu_aug2.0_1999.1_32002 |
|---|---|
| Locus | scaffold1999.1 : 53966 ... 77601 : + |
| To GenomeBrowser | scaffold1999.1:53966..77601 |
| Genes list of scaffold | scaffold1999.1 |
| Synonym | pfu_aug1.0_19860.1_04044 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1999.1_32002.t1 | 4 | 1 | GCC2_GCC3 | 145 | 154 | 4.8e-17 | 61.2 | 0.12 | 340.0 | 0.9 |
| pfu_aug2.0_1999.1_32002.t1 | 4 | 2 | GCC2_GCC3 | 152 | 199 | 4.8e-17 | 61.2 | 6.4e-17 | 1.9e-13 | 49.7 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 1 | EGF | 164 | 170 | 1.1e-10 | 41.2 | 5.0 | 15000.0 | -4.3 |
| pfu_aug2.0_1999.1_32002.t1 | 4 | 3 | GCC2_GCC3 | 206 | 253 | 4.8e-17 | 61.2 | 1.6e-09 | 4.6e-06 | 26.0 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 1 | TSP_1 | 215 | 222 | 2.8e-12 | 46.5 | 5.0 | 15000.0 | -4.3 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 2 | EGF | 441 | 469 | 1.1e-10 | 41.2 | 2.4e-08 | 7.1e-05 | 22.6 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 2 | TSP_1 | 445 | 449 | 2.8e-12 | 46.5 | 5.0 | 15000.0 | -4.5 |
| pfu_aug2.0_1999.1_32002.t1 | 4 | 4 | GCC2_GCC3 | 458 | 458 | 4.8e-17 | 61.2 | 5.0 | 15000.0 | -10.9 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 3 | TSP_1 | 467 | 483 | 2.8e-12 | 46.5 | 5.0 | 15000.0 | -5.3 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 3 | EGF | 478 | 507 | 1.1e-10 | 41.2 | 1.1e-10 | 3.3e-07 | 30.1 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 4 | TSP_1 | 519 | 570 | 2.8e-12 | 46.5 | 9.3e-16 | 2.8e-12 | 46.5 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 4 | EGF | 686 | 695 | 1.1e-10 | 41.2 | 0.39 | 1100.0 | -0.4 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 5 | TSP_1 | 723 | 734 | 2.8e-12 | 46.5 | 1.1 | 3300.0 | -1.8 |
| pfu_aug2.0_1999.1_32002.t1 | 5 | 5 | EGF | 778 | 785 | 1.1e-10 | 41.2 | 1.7 | 5100.0 | -2.5 |
Transcript
| Transcript ID | pfu_aug2.0_1999.1_32002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1999.1_32002.t1 atgtcagtgaactattacttcgacggaaactgccaggatgaatccgtacaacaggaaatcaagaataagtttattgacac actgaaatcttctgtttatgatgatgcatgtacaatttacgcagatggttgtattgcttcaaatgtaaagatatattgcg gagatgaagagcgaaagcgtaagagatctgcagagctgaaagtggactttgaaatcgaaataacaattacaacaacagac gactttgatgatacctacaccacattacgaggacatatagatgaaattaccactccaatatctgaggccgtcctgaacag ctctttggatctttcggccgtttgtaactgcactgctaaagccttagatataagctccagtgatttagaattgagatgcc caaacaacacgctaccatcataccctaccctgtcatgtgttgaatgtgcggagggatcgtatctgtcgtccggagaaagc caatgtatccaatgtccacggggtacttatcaacctgatggcggccaggaggaatgtctgccatgtccctatgggaagac cactgataccataggagctgcctcagcaataagttgtgaagatggttgtgagcctggcacatggtcaactaatggcctgc caccatgctccctctgctcgatcggtacatactcagatatatacggttcaaatggatgtatcagatgtaacggttctaaa acaactgttgtacaaggcggcgatgataaagcagtgtgtcaagaatttgatgcggtactttccgatcatcacagtttctt aacctcgtctatagacatatcaggaaaccactcttcattctccttgtcgttttgggtgcaaaataatgatctggataatt cctccttgactattcgacttaaacgcaatacagaggatctgctcacgttgaatctaagctctgaagtgttcattgacatt gagagcagatccacattagagttagggcaatacccagaggacgggcgatggcatccattcatttttatcttccggtataa cgatgttgagtacattctacacaatttcagtaaaatcgaaaacttaccatatcctgttttgttaacacaagggaacctca gtatctcattgcagggtaaaggtaaattttcaagactccatatatggtccgacgtatacgacagagaaagtctcaaaaca aaaacaacaaaatgcgatgtaaatgcagccggggacattttcaattggaaagagatggaagctggtgatgaaagtgacgt cttctttcaaattccaagcgaatgtgacgatgttgatgactgcaatccaaacccttgtaaaaatggtacatgctttgaag aaggtaacggatatatatgtcgctgtgattatggtttccacggcaacaattgtgaaatcaatgctgatgactgtcaggac aatgtatgtgagaacaacgcaacctgcctcgacggcgcggcaaactacacgtgcttatgtcctgagaattatattggaga attctgtgaaacattcctagttaatggtcagtggagcacttggaacgagtggtcagtatgttcagtatcttgcggaaatg gtacagcgacaagaacacgactgtgtaataaccccactccggacaatggaggacagaactgtcagggaaacgatacagat ttgaaaccctgtatcgatacagaaatatgtccatattgtagtaaccttaccgctccatccaacagcaccttagactgtac gacttttagtaatggaacaataaactgtacactgcagtgtgatgatgggtatgactttgatcatactccaaacccatact atctgtgtgggccggataccttcttcctgtgggactaccaaaccgatgataatgtatttggacggctgccatactgtaac gctataagtctcggcgacaagctaacagcatcctacgaggtccgctatgaacacctcaaatgtcattctgaatcaatgac agccgacacaacttctgccatcacagatgctgtaaatatagtcgttcgtcaggtcggctgtattcaaactggcatctgtc aacacagggagtcaacaattaaggactgcgtgacgaggtccaaaagatcggcaaattctacatatgttggagtcaacact atccttgattgtaaagctaactcacacggtacagaggcttgttacacagctctgaatctggcaatacaggacctaaacaa ccacgtggacaacaatacatttgatgtcctagtacaggggatattgtacgaggttgatcctgattacactgtgatcaacg gagtagtttcttgtccaactggatatgtacagataagatattattgcggtatgcttgacaaatatggataa |
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Protein
| Protein ID | pfu_aug2.0_1999.1_32002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1999.1_32002.t1 MSVNYYFDGNCQDESVQQEIKNKFIDTLKSSVYDDACTIYADGCIASNVKIYCGDEERKRKRSAELKVDFEIEITITTTD DFDDTYTTLRGHIDEITTPISEAVLNSSLDLSAVCNCTAKALDISSSDLELRCPNNTLPSYPTLSCVECAEGSYLSSGES QCIQCPRGTYQPDGGQEECLPCPYGKTTDTIGAASAISCEDGCEPGTWSTNGLPPCSLCSIGTYSDIYGSNGCIRCNGSK TTVVQGGDDKAVCQEFDAVLSDHHSFLTSSIDISGNHSSFSLSFWVQNNDLDNSSLTIRLKRNTEDLLTLNLSSEVFIDI ESRSTLELGQYPEDGRWHPFIFIFRYNDVEYILHNFSKIENLPYPVLLTQGNLSISLQGKGKFSRLHIWSDVYDRESLKT KTTKCDVNAAGDIFNWKEMEAGDESDVFFQIPSECDDVDDCNPNPCKNGTCFEEGNGYICRCDYGFHGNNCEINADDCQD NVCENNATCLDGAANYTCLCPENYIGEFCETFLVNGQWSTWNEWSVCSVSCGNGTATRTRLCNNPTPDNGGQNCQGNDTD LKPCIDTEICPYCSNLTAPSNSTLDCTTFSNGTINCTLQCDDGYDFDHTPNPYYLCGPDTFFLWDYQTDDNVFGRLPYCN AISLGDKLTASYEVRYEHLKCHSESMTADTTSAITDAVNIVVRQVGCIQTGICQHRESTIKDCVTRSKRSANSTYVGVNT ILDCKANSHGTEACYTALNLAIQDLNNHVDNNTFDVLVQGILYEVDPDYTVINGVVSCPTGYVQIRYYCGMLDKYG |
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