Gene
| Gene Model ID | pfu_aug2.0_2.1_06679 |
|---|---|
| Locus | scaffold2.1 : 101527 ... 119805 : - |
| To GenomeBrowser | scaffold2.1:101527..119805 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_5912.1_02094 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06679.t1 | 1 | 1 | Gelsolin | 66 | 105 | 1.9e-09 | 37.0 | 1.0e-12 | 3.8e-09 | 36.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06679.t1 | gi|551492625|ref|XP_005797882.1| | PREDICTED: villin-1-like [Xiphophorus maculatus] | 4.0e-16 |
| pfu_aug2.0_2.1_06679.t1 | gi|658908669|ref|XP_008394427.1| | PREDICTED: villin-like protein [Poecilia reticulata] | 6.0e-16 |
| pfu_aug2.0_2.1_06679.t1 | gi|514696532|ref|XP_004995836.1| | scinderin isoform 2 [Salpingoeca rosetta] | 7.0e-16 |
| pfu_aug2.0_2.1_06679.t1 | gi|723150330|ref|XP_010292586.1| | PREDICTED: LOW QUALITY PROTEIN: adseverin-like, partial [Phaethon lepturus] | 8.0e-16 |
| pfu_aug2.0_2.1_06679.t1 | gi|54020823|ref|NP_001005657.1| | villin-like protein [Xenopus (Silurana) tropicalis] | 8.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06679.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06679.t1 atgagctcgcggcggcagagcgcggattgtattacgtacgccctctttctcacctctaaggtcctgggttcgaatcccag attcggcgaagggtcttatgtaggagggtactcaactggtggggtaaagtcaggatttaaccatgtagataaaaccttca aagaaagactgcttcacctgaagggaaaacatcacgtcagagtgacagaggtacctttgagttggagctctatgaaccac ggagatgtattcatcctggacttaggcaaagtactgtttctatggacaggtaaagaagcaagtcggactgagaaacgtaa gattaatttcgaaaacggagggatgatttctgtgatgcttgtcatcggctgtattggattttccatggtaacaggccaag atgtccaggcggattgtcccttgaatgggagtctgtctttagttgccgattatggcagagcaactgctaacatgagcaga attaccatccccggaatagataataccgatgtaaaattctttcctgaggtcgttgaagaaggcacacggagtgtttatta ttggtaccctaataccacacatatttgtccattagaggtaacggtaactgtttacagatgtaatagcagtgaactatcca caactttaatgaaatatagtaactgcaacggtttggaaatagggaagtcttgtatagcttactgcccggaaggttacata tcagacgcatcaccgccagagtttacatgtgcacttcgtaatgataacacgacttactggactaaacatcaaaactcgta ttcttgcttaagtatgggtaagacgtgtacagtaccaacatttgaagaaggagcaactatagagggcgtattacccaatg agacgttttatatatttacatgggaaaagaaagtctgcaaggaaggatacgcctttcctgaggattttgaggacgatcat gtaaggatagtatgttctgaggacgctaatgataacatggtatggatgtattggaacatgcggaaatgtagcaggaaata tatgccatattcatgtgaaaggcgagttgaaatggagaaagaaaaggacaacgtaggaatgtacgaatttgtttacagtt tcactgaatgggagcaaatcgaaaatcaaaataaatcggaatgtttctatcatgcaaaacagtcatcggctaaaaataga atgtataatcttgaaatgacattcgaaaccaacgtaacagacgtaccttacttaaaggagaactgtttcttccaagtctt attgtattctggaagacaggagtataatacgccaatgaagacacacctgttgctccctgtcgtctgtccggctgcatgga agatgctttacatggctataaagttagtatttacgctgcagatagagacagtatgtttgatctttttcgaagacgttgcc atacagatttccaaatacaaaatggtgttcaaaggatttgtcttcaccagacaaagtcacgatacaacaataagtattgt cgaagactttcaacatcaacaccggtaa |
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Protein
| Protein ID | pfu_aug2.0_2.1_06679.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06679.t1 MSSRRQSADCITYALFLTSKVLGSNPRFGEGSYVGGYSTGGVKSGFNHVDKTFKERLLHLKGKHHVRVTEVPLSWSSMNH GDVFILDLGKVLFLWTGKEASRTEKRKINFENGGMISVMLVIGCIGFSMVTGQDVQADCPLNGSLSLVADYGRATANMSR ITIPGIDNTDVKFFPEVVEEGTRSVYYWYPNTTHICPLEVTVTVYRCNSSELSTTLMKYSNCNGLEIGKSCIAYCPEGYI SDASPPEFTCALRNDNTTYWTKHQNSYSCLSMGKTCTVPTFEEGATIEGVLPNETFYIFTWEKKVCKEGYAFPEDFEDDH VRIVCSEDANDNMVWMYWNMRKCSRKYMPYSCERRVEMEKEKDNVGMYEFVYSFTEWEQIENQNKSECFYHAKQSSAKNR MYNLEMTFETNVTDVPYLKENCFFQVLLYSGRQEYNTPMKTHLLLPVVCPAAWKMLYMAIKLVFTLQIETVCLIFFEDVA IQISKYKMVFKGFVFTRQSHDTTISIVEDFQHQHR |
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