Gene
| Gene Model ID | pfu_aug2.0_2.1_06695 |
|---|---|
| Locus | scaffold2.1 : 585959 ... 619210 : - |
| To GenomeBrowser | scaffold2.1:585959..619210 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_9415.1_09947 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06695.t1 | 2 | 1 | Y_phosphatase | 656 | 688 | 0.0 | 173.9 | 0.073 | 540.0 | -0.3 |
| pfu_aug2.0_2.1_06695.t1 | 2 | 2 | Y_phosphatase | 748 | 964 | 0.0 | 173.9 | 0.0 | 0.0 | 172.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06695.t1 | gi|499021335|ref|XP_004561446.1| | 7.0e-24 | |
| pfu_aug2.0_2.1_06695.t1 | gi|548523147|ref|XP_005751433.1| | PREDICTED: multiple epidermal growth factor-like domains protein 6-like [Pundamilia nyererei] | 5.0e-23 |
| pfu_aug2.0_2.1_06695.t1 | gi|541966195|ref|XP_005447554.1| | PREDICTED: LOW QUALITY PROTEIN: multiple EGF-like-domains 6 [Falco cherrug] | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06695.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06695.t1 atgagatgttcaccatgtccaggtggtaaatacggtaacggctgcagtagaacgtgttcttcaggatgcagtaatacacc atgtaatcgagttagtggacattgttcaccctgtctgagtggctactctggggacaggtgttcaccgtgtacacagggaa gatttggaattgactgtaaaagtgaatgtgatttttgttcgaattcaaattgtgataatcatgggtcttgtcgttattgt tatgcaggcaagtatgggcaattttgtaacaatacatgtcctatagcctgtgggggcatcggtgcatgcaacaaaacgac tggaatatgccttaattgtaggaaaggattttacggtaaacactgcgatatctcttgtagtgcaaattgtagagctaaga catgtagtagaagtggatcttgtacaaacggctgtgtgaatggttgggtcggtgtcaaatgtgatcagcagtgtgttttt aataattgtgcagaatgcaaagcagacattcatggtaaagcatattgctcaatgtgtaatgatggctggtttctctctgg tgctacatgtttaaaatgccctgtaaattgtacgctttgtgaaagcggttcacgatgttcgaaatgtgttaaaggtcaat caggaaggacttgttctaaagaatgtaacaaaaattgcattaataaaacctgtaacatagacggaaaatgcgatagtgga tgtttacctggacattatgatacaacttgtgacaagcgatgtagtgacaagtgtttaggaggatatcaagaatgtagtaa agatgggtattgtctaaggggatgtacaaacagaactcatggtagagactgtaatctttcatgtaaacaacactgtttat catgttacagtaactacaactgctctaaatgtgaagacggatattatggaagatactgcaattatcaatgtccaacaaac tgtttatcttgcgaaaatgatttattttgttcaaagtgctcacatggatatcatggaacaagttgtcagagaagatgtcc gaataattgcgtgtcctgttcaaatgaaaaattttgccttctgtgcgagaccggatggtctggaagtatttgccaatgta acgtaaactgtagcgatagttgtggagagaatggtcaatgcaagagtggctgtaaggatggattgtacgggattagatgt gagcgtccgtgtccatatcaggattgcgagacatgtaaccaaacgtctgggaactgtagtatatgtgtcagtggaaaata tggtcaacattgtgacaaaaattgcagtaagaattgtttaggaaaagcctgtgccataagtggaaaatgtcttcaggggt gtgccgttggattcactggtgaaacatgcactgtacgtaaagttgaagatgaatcctttcctctgcttcctgtcatactt agtacgttagctgtcattatcatgctggctatactggttgttgtctttttatcaagaaggaaatcaaagaatgcccaaaa gatgcaagaggaatccagagcaccagcagttgtcatgtctgctttaaaaccagagtcaatggtctatgaaaatatggatt tatcagataaagcttcagaagccccagcccaagctcctgtcatagagacgaagaaagaagacaagtctatttacgccagt agaggttcatatgctctgctcatcgaggtgggttcggaatttaccgatattcagggaaccgaaagcactaatgatgtcgt acagcaggcagagtatggtaatgtacaagtgaataagatagctgtctccgctctatcggatgtgatacagaaaaagaaag acaatgacgaatttcagactgaatttgagggattcggcagggagaatgcatttattgcagcccaagaagaaatgttggaa atattggccagacaacaaagaaggatatggatcatgcgacgtgagtttgacaaagacaacgatatacacaaactgtgtcg tcaggactttgactgcgaaaaaggtaaggaacagtacaagtttctgcacgaagccttattagagggactgactatgaaag actcatctgtagacaccaaagactttccagcgatgtacgacaaaatcaaacggaaaaaccctaagtctggcaaaactttt ctggaggagcaattcgatgccatgaatacgatgataccaaatttcaaggaaggtaactttgcaacagccaagctaccaga gaataggaaaaagaaccgctactccaatattcttgcagctgataactgtcgtttctttgttacaagctctactggtagtg actacatcaatgccatagctataccaagccacaacaagacagctgcctttgctctgactcagatgcctcttcctgacacg agagaggatttctggaacctcgttctgagtcagagcatgacaactatagtgatgatgaatgttgttaaaaaggaaaagga tcctgatatttattggccaatgtcgggttcgtctacgtttggaaaaataaaagtccaacaactggaagaagatgttacta atgaagcatacagaatactgaagctcggtgttacgaatgtcgggtcaaatgaatgtctggtagtgaagcagttccagtgc aaattttggtctgatgagaatgccgttccacgtgataccctacaaatgctgcagctgatggatgacgtcgactcttggca gagatctaacgataatcccacaatagtcgctcattgtctggacggtgcaaggcagagcggtttattttgtgctgtagcgg ccatcttagaatgtgtaagagctgagcagagggtaaatatcgtgagaatcatcagtcaaatgaggagtaaacgtcggcaa atagtgtctagtcagataacagataaaatgttaccctccgttcacagtatgttgccggccacggaggccacgtttccagc cacagtggacgaaacgtggtga |
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Protein
| Protein ID | pfu_aug2.0_2.1_06695.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06695.t1 MRCSPCPGGKYGNGCSRTCSSGCSNTPCNRVSGHCSPCLSGYSGDRCSPCTQGRFGIDCKSECDFCSNSNCDNHGSCRYC YAGKYGQFCNNTCPIACGGIGACNKTTGICLNCRKGFYGKHCDISCSANCRAKTCSRSGSCTNGCVNGWVGVKCDQQCVF NNCAECKADIHGKAYCSMCNDGWFLSGATCLKCPVNCTLCESGSRCSKCVKGQSGRTCSKECNKNCINKTCNIDGKCDSG CLPGHYDTTCDKRCSDKCLGGYQECSKDGYCLRGCTNRTHGRDCNLSCKQHCLSCYSNYNCSKCEDGYYGRYCNYQCPTN CLSCENDLFCSKCSHGYHGTSCQRRCPNNCVSCSNEKFCLLCETGWSGSICQCNVNCSDSCGENGQCKSGCKDGLYGIRC ERPCPYQDCETCNQTSGNCSICVSGKYGQHCDKNCSKNCLGKACAISGKCLQGCAVGFTGETCTVRKVEDESFPLLPVIL STLAVIIMLAILVVVFLSRRKSKNAQKMQEESRAPAVVMSALKPESMVYENMDLSDKASEAPAQAPVIETKKEDKSIYAS RGSYALLIEVGSEFTDIQGTESTNDVVQQAEYGNVQVNKIAVSALSDVIQKKKDNDEFQTEFEGFGRENAFIAAQEEMLE ILARQQRRIWIMRREFDKDNDIHKLCRQDFDCEKGKEQYKFLHEALLEGLTMKDSSVDTKDFPAMYDKIKRKNPKSGKTF LEEQFDAMNTMIPNFKEGNFATAKLPENRKKNRYSNILAADNCRFFVTSSTGSDYINAIAIPSHNKTAAFALTQMPLPDT REDFWNLVLSQSMTTIVMMNVVKKEKDPDIYWPMSGSSTFGKIKVQQLEEDVTNEAYRILKLGVTNVGSNECLVVKQFQC KFWSDENAVPRDTLQMLQLMDDVDSWQRSNDNPTIVAHCLDGARQSGLFCAVAAILECVRAEQRVNIVRIISQMRSKRRQ IVSSQITDKMLPSVHSMLPATEATFPATVDETW |
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