Gene
| Gene Model ID | pfu_aug2.0_2.1_06697 |
|---|---|
| Locus | scaffold2.1 : 687405 ... 707036 : + |
| To GenomeBrowser | scaffold2.1:687405..707036 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_16256.1_03689 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase csk | GO:0000166 GO:0004713 GO:0006468 GO:0044699 GO:0048523 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06697.t1 | 3 | 1 | SH3_1 | 41 | 88 | 7.4e-16 | 57.2 | 1.4e-18 | 2.3e-15 | 55.7 |
| pfu_aug2.0_2.1_06697.t1 | 2 | 1 | SH3_2 | 41 | 93 | 1.6e-12 | 46.7 | 2.5e-14 | 4.1e-11 | 42.1 |
| pfu_aug2.0_2.1_06697.t1 | 2 | 1 | SH3_9 | 42 | 92 | 7.1e-09 | 35.1 | 1.6e-11 | 2.6e-08 | 33.3 |
| pfu_aug2.0_2.1_06697.t1 | 1 | 1 | SH2 | 104 | 179 | 3.4e-21 | 74.8 | 4.9e-24 | 8.1e-21 | 73.6 |
| pfu_aug2.0_2.1_06697.t1 | 3 | 2 | SH3_1 | 112 | 131 | 7.4e-16 | 57.2 | 1.0 | 1700.0 | -1.5 |
| pfu_aug2.0_2.1_06697.t1 | 1 | 1 | Pkinase_Tyr | 222 | 464 | 0.0 | 283.1 | 0.0 | 0.0 | 282.7 |
| pfu_aug2.0_2.1_06697.t1 | 1 | 1 | Pkinase | 222 | 462 | 0.0 | 157.4 | 0.0 | 0.0 | 156.6 |
| pfu_aug2.0_2.1_06697.t1 | 2 | 2 | SH3_2 | 279 | 306 | 1.6e-12 | 46.7 | 0.14 | 230.0 | 1.3 |
| pfu_aug2.0_2.1_06697.t1 | 2 | 2 | SH3_9 | 282 | 291 | 7.1e-09 | 35.1 | 4.0 | 6600.0 | -3.3 |
| pfu_aug2.0_2.1_06697.t1 | 3 | 3 | SH3_1 | 283 | 290 | 7.4e-16 | 57.2 | 4.0 | 6600.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06697.t1 | gi|524864538|ref|XP_005089104.1| | PREDICTED: tyrosine-protein kinase CSK-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2.1_06697.t1 | gi|390334050|ref|XP_795344.3| | PREDICTED: tyrosine-protein kinase CSK [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_2.1_06697.t1 | gi|697002100|ref|XP_009567150.1| | PREDICTED: tyrosine-protein kinase CSK [Cuculus canorus] | 0.0 |
| pfu_aug2.0_2.1_06697.t1 | gi|602659932|ref|XP_007435651.1| | PREDICTED: tyrosine-protein kinase CSK [Python bivittatus] | 0.0 |
| pfu_aug2.0_2.1_06697.t1 | gi|543749544|ref|XP_005515494.1| | PREDICTED: tyrosine-protein kinase CSK [Columba livia] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06697.t1 atgagacttacaaattctgtacagagtaattttggtgagattttcaaattctgtacagagttatttggagtaattttgaa ttctgctcctggggaggtgtggaaggaggggacggatgtcatagctacctataacttcccaggatcatcccctgaagatc tacccttcaaaaagggggatgttattaaaatcatatcaaatacaaaagactcaaactggtataaaggcaggaatagtcag ggaaaagaaggcatgattcctgcaccgtatgtacagaaaaggaaagaggttcatctccaaaaaatgccctggtttcatgg acgtatcaccagagaggaagcggaacatctcctagtggagaagaatgacggggtattcctgatccgggacagcgtacact ttcagggtgattttaccttgtccatagcattccagggtaaagtggagcactacagaatcatagccaaacataacatgctg gaagttgacgggggagagtgtctgtttgagaacctgatccagctggtcaagcattacacgcttgatgctgacggattatg tacacggctaatacagccgttacagaagaagggtgatgccttttctgccgtacagatggatgactttgaggcgggaggtt gggtaataccaagcagagatttacaagaaatagaactcataggtcatggtgaatttggagatgtgtataaaggtctatac aaaaatcaatttgttgcaatcaaacagttaaaggataaaaacagagctgcacaagctttccttaaggaggcctctgttat gacgaatcttaggcaccccaaccttgtccagatgattggcatagtgaagggagacatgatcaaactggttacagagttta tgggcaagggtaatctggtagagtaccttagatcaagggggaggagtgtcatacgcaaaaaagaccagattgactttgcc actgatacgtgttcggcaatggcatacctagaaagtaaaaccctggttcacagagacttagcagccagaaatattcttat caatgcagataactgtgctaaggtatctgattttggtttggccaagtatggtgattttaacacggaaggaggcaaatttc ctatcaagtggacggcacctgaggccttaagagataataaattctcaaacaagtcagatgtctggagttttggtatactg ttatgggaactctactcatttggccgagtaccatatccaagaattcctcttcaagacgttgtggtgcatgtaaacggagg ttacagaatggagtcaccagaaggatgtccagcggaagtatatcagattatgttaaaagcttggaacttggatcctgaca aaagacccatgtttaaagacattttagtagaactagataatttacggtgtacaactgtatag |
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Protein
| Protein ID | pfu_aug2.0_2.1_06697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06697.t1 MRLTNSVQSNFGEIFKFCTELFGVILNSAPGEVWKEGTDVIATYNFPGSSPEDLPFKKGDVIKIISNTKDSNWYKGRNSQ GKEGMIPAPYVQKRKEVHLQKMPWFHGRITREEAEHLLVEKNDGVFLIRDSVHFQGDFTLSIAFQGKVEHYRIIAKHNML EVDGGECLFENLIQLVKHYTLDADGLCTRLIQPLQKKGDAFSAVQMDDFEAGGWVIPSRDLQEIELIGHGEFGDVYKGLY KNQFVAIKQLKDKNRAAQAFLKEASVMTNLRHPNLVQMIGIVKGDMIKLVTEFMGKGNLVEYLRSRGRSVIRKKDQIDFA TDTCSAMAYLESKTLVHRDLAARNILINADNCAKVSDFGLAKYGDFNTEGGKFPIKWTAPEALRDNKFSNKSDVWSFGIL LWELYSFGRVPYPRIPLQDVVVHVNGGYRMESPEGCPAEVYQIMLKAWNLDPDKRPMFKDILVELDNLRCTTV |
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