Gene
| Gene Model ID | pfu_aug2.0_2.1_06700 |
|---|---|
| Locus | scaffold2.1 : 729065 ... 734729 : + |
| To GenomeBrowser | scaffold2.1:729065..734729 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_6523.1_45458 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06700.t1 | 1 | 1 | UPF0515 | 38 | 204 | 7.42688e-44 | 149.8 | 0.0 | 9.94922e-44 | 149.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06700.t1 | gi|344283343|ref|XP_003413431.1| | PREDICTED: UPF0515 protein C19orf66 homolog [Loxodonta africana] | 4.0e-34 |
| pfu_aug2.0_2.1_06700.t1 | gi|594631490|ref|XP_007169276.1| | PREDICTED: UPF0515 protein C19orf66 homolog [Balaenoptera acutorostrata scammoni] | 5.0e-34 |
| pfu_aug2.0_2.1_06700.t1 | gi|586489499|ref|XP_006875219.1| | PREDICTED: UPF0515 protein C19orf66 homolog [Chrysochloris asiatica] | 6.0e-34 |
| pfu_aug2.0_2.1_06700.t1 | gi|585706572|ref|XP_006898823.1| | PREDICTED: UPF0515 protein C19orf66 homolog [Elephantulus edwardii] | 1.0e-33 |
| pfu_aug2.0_2.1_06700.t1 | gi|593715827|ref|XP_007104371.1| | PREDICTED: UPF0515 protein C19orf66 homolog isoform X1 [Physeter catodon] | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06700.t1 atgcgtcggggaaagtcgataatagatcgggattgcatcgggaatagatcggagtttaatcggattgaacgggacttggt cggcaataattacatccaaaatatacaaagtgacttggacttggcgagaaatgctaaagagaggcggatcccgacccaga ggcgacagtttgcctgtgtagactgtgacaatgcttggtggcaaacagtacctgcaaggaaaatggtgtctaaatgccat aggtgtcataggaaatataacgccttgccacgtgaggatgaatggggctggggcgagttctcatgcccgtcatgtggaaa ccatttcaatggctttgctcacatgaacaggacacagagctcttgttaccagtgtgggacccttgtttatcccatgtccg tccgtccaccagaacgaaggagtggtcagcggcggtcagagaacacgcacagctgtacgggatgccgaggtagaggtcgg ggtggtggtggtggtggtagaggtggtggtggaatgtgcgttcatccacagacaccacgtgcacggcaagttctagtggg cagtggattgcacgtaagttctggatccacagtggatagtattttgagtgatgacgtatcatcagtcagtggccgttctt ctcgacctccgtctgagccgagtataccagaagatgacgaagatggacagaacggacattaa |
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Protein
| Protein ID | pfu_aug2.0_2.1_06700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06700.t1 MRRGKSIIDRDCIGNRSEFNRIERDLVGNNYIQNIQSDLDLARNAKERRIPTQRRQFACVDCDNAWWQTVPARKMVSKCH RCHRKYNALPREDEWGWGEFSCPSCGNHFNGFAHMNRTQSSCYQCGTLVYPMSVRPPERRSGQRRSENTHSCTGCRGRGR GGGGGGRGGGGMCVHPQTPRARQVLVGSGLHVSSGSTVDSILSDDVSSVSGRSSRPPSEPSIPEDDEDGQNGH |
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