Gene
| Gene Model ID | pfu_aug2.0_2.1_06706 |
|---|---|
| Locus | scaffold2.1 : 878623 ... 887213 : + |
| To GenomeBrowser | scaffold2.1:878623..887213 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_497.1_15089 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06706.t1 | 1 | 1 | TGFb_propeptide | 4 | 81 | 2.0e-10 | 40.3 | 3.8e-14 | 2.8e-10 | 39.8 |
| pfu_aug2.0_2.1_06706.t1 | 1 | 1 | TGF_beta | 127 | 229 | 1.6e-35 | 121.5 | 3.0e-39 | 2.2e-35 | 121.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06706.t1 | gi|676486640|ref|XP_009064040.1| | hypothetical protein LOTGIDRAFT_195882, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2.1_06706.t1 | gi|556752834|ref|XP_005971802.1| | PREDICTED: bone morphogenetic protein 6 [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_2.1_06706.t1 | gi|555992956|ref|XP_005911840.1| | PREDICTED: LOW QUALITY PROTEIN: bone morphogenetic protein 6 [Bos mutus] | 0.0 |
| pfu_aug2.0_2.1_06706.t1 | gi|742101078|ref|XP_010834186.1| | PREDICTED: bone morphogenetic protein 6, partial [Bison bison bison] | 0.0 |
| pfu_aug2.0_2.1_06706.t1 | gi|602630583|ref|XP_007422205.1| | PREDICTED: bone morphogenetic protein 6 [Python bivittatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06706.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06706.t1 atggccaaaaaggacaaggagcttgagttgatcagtaatctgacagtaccagcagactacgagggatggctgaccttgaa cttgacacgagcggccagtctgtggacagctataccggaaaccaacctgggactctatatgaaaattatctttttgaaga aaggtcgtgatgttcctccggggaaatttggaattgtgggtaggaagggaccggaagagaagcaaccgtttatggttggc tttttctcatcaacggaagaactccacgtcagacgcacgcgcactgcaatacgaagacgtagagaagaatattcatacag agaaggagcggaaaaatatttcaaaccttcacgtaaaaagagagcaataacaagatggccgtgtcaacgtcagtctctat acgtaaagttcagagatttaggctggcagcattggattatcgcccctgatggataccaagcgtttttctgtgatggggaa tgttcctttccgttagggtcctccattaacgccaccaatcacgccatcgtacagaacctcgtccatcttctcaataaata cgaggctccaagccccggatgtgcgccaaccaaacttggcgcacagtctgtactttactttgatgataattttaatgtta tcttaaagaaatttccaaaaatgatcgttaaagcatgtggatgtcattga |
|
Protein
| Protein ID | pfu_aug2.0_2.1_06706.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06706.t1 MAKKDKELELISNLTVPADYEGWLTLNLTRAASLWTAIPETNLGLYMKIIFLKKGRDVPPGKFGIVGRKGPEEKQPFMVG FFSSTEELHVRRTRTAIRRRREEYSYREGAEKYFKPSRKKRAITRWPCQRQSLYVKFRDLGWQHWIIAPDGYQAFFCDGE CSFPLGSSINATNHAIVQNLVHLLNKYEAPSPGCAPTKLGAQSVLYFDDNFNVILKKFPKMIVKACGCH |
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