Gene
| Gene Model ID | pfu_aug2.0_2.1_06707 |
|---|---|
| Locus | scaffold2.1 : 888773 ... 899479 : + |
| To GenomeBrowser | scaffold2.1:888773..899479 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_497.1_15088 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium- and chloride-dependent gaba transporter ine-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06707.t1 | 2 | 1 | SNF | 47 | 109 | 3.5e-27 | 95.0 | 1.7e-12 | 2.5e-08 | 32.8 |
| pfu_aug2.0_2.1_06707.t1 | 2 | 2 | SNF | 105 | 389 | 3.5e-27 | 95.0 | 1.7e-23 | 2.5e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06707.t1 | gi|684373160|ref|XP_009164333.1| | hypothetical protein T265_12894 [Opisthorchis viverrini] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06707.t1 atgatactgaaggtatgtgatacctgtgataacggcgacaccaaaacatcaaacatgtcccgtaatgtactcattacaga gtcggatacacaaaaagagcgagataaccctgttttacaatgtcagaaagccgaggaacgagcattgttttcgtcaaaga tcggtttgatctgtagctgtctgggttgtgtagttgggacaggaaatatatggagattcccgagggtcgtagctaggaat agtgacgaggaaggaggtctagttttcctgatagtatggattgcgttcctgttcctctggtcagcgcccatcctccttat agagtacgagtcgctgaaggatccacgtgtttgggtggacgcagtgtctcagaacgcctttgacacgggggcaggtgctg gggtgatgttatcgtatgccacctttatgagcgtggataatggcatcgtaaaatacggcatgcttattccagcaacaaac aacctcgtaagtttgatatgtggcatcatggtgttttctatcgtattttccacactgatcactacacggccatctataac caagggtgatatcataaatataatgaaagagagtggaccagcaagtactggtcttacgtttatatggatacctgtactgt ttgagacgataggtggttttggacgtgtgctctgtatcctcttctttgtgtgtttgtcctttgctggtaccagctccctt attgctaacgtagaacttgttacacacaccctatgtgactttggaatgcctagaaagggagccatgtttctatgtatcct tggtcttttcgctttgggactaccatctgcaatggatctggacattctaaccaatcaggattttgtatggggatttgctc tagtgataaatggaatgatgttgcagtatatggtcattaggtatggcaccagaaaattcagggaccgagctttcaactcc tatagtataggggactggccactaccgaggatttgggaatggattgtcaaatttgtggcacctttggaggcattagttat cataggatggtggatgtatgatttgatagaccaggagtctgtggatggagacgaaaagtggtatgactttggcaaagaaa cattagtcatgacacttgtgcagtgggcaggtttaatggttctcgtcatctcctgtaatggactggttctaatctgccgg aaagtgatgaaaaacgaagagacggttttattgataaaacatgagattctaacaaactcacgagaggactccaaagaata tgcatcaatacgcagtattgagaaaaagtcatcgacaaaagaggttaaattatga |
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Protein
| Protein ID | pfu_aug2.0_2.1_06707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06707.t1 MILKVCDTCDNGDTKTSNMSRNVLITESDTQKERDNPVLQCQKAEERALFSSKIGLICSCLGCVVGTGNIWRFPRVVARN SDEEGGLVFLIVWIAFLFLWSAPILLIEYESLKDPRVWVDAVSQNAFDTGAGAGVMLSYATFMSVDNGIVKYGMLIPATN NLVSLICGIMVFSIVFSTLITTRPSITKGDIINIMKESGPASTGLTFIWIPVLFETIGGFGRVLCILFFVCLSFAGTSSL IANVELVTHTLCDFGMPRKGAMFLCILGLFALGLPSAMDLDILTNQDFVWGFALVINGMMLQYMVIRYGTRKFRDRAFNS YSIGDWPLPRIWEWIVKFVAPLEALVIIGWWMYDLIDQESVDGDEKWYDFGKETLVMTLVQWAGLMVLVISCNGLVLICR KVMKNEETVLLIKHEILTNSREDSKEYASIRSIEKKSSTKEVKL |
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