Gene
| Gene Model ID | pfu_aug2.0_2.1_06717 |
|---|---|
| Locus | scaffold2.1 : 1055512 ... 1063639 : - |
| To GenomeBrowser | scaffold2.1:1055512..1063639 |
| Genes list of scaffold | scaffold2.1 |
| Synonym | pfu_aug1.0_8035.1_31512 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2.1_06717.t1 | 1 | 1 | 7tm_1 | 28 | 292 | 5.2e-06 | 25.7 | 5.4e-10 | 8.0e-06 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2.1_06717.t1 | gi|524897945|ref|XP_005105427.1| | PREDICTED: dentin sialophosphoprotein-like [Aplysia californica] | 2.00386e-43 |
| pfu_aug2.0_2.1_06717.t1 | gi|126329522|ref|XP_001377145.1| | PREDICTED: probable G-protein coupled receptor 153 [Monodelphis domestica] | 2.0e-10 |
| pfu_aug2.0_2.1_06717.t1 | gi|395526194|ref|XP_003765253.1| | PREDICTED: probable G-protein coupled receptor 153 [Sarcophilus harrisii] | 5.0e-09 |
| pfu_aug2.0_2.1_06717.t1 | gi|564354289|ref|XP_006239547.1| | PREDICTED: probable G-protein coupled receptor 153 isoform X1 [Rattus norvegicus] | 2.0e-08 |
| pfu_aug2.0_2.1_06717.t1 | gi|564354291|ref|XP_006239548.1| | PREDICTED: probable G-protein coupled receptor 153 isoform X2 [Rattus norvegicus] | 3.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_2.1_06717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06717.t1 atgacgtcactcagtactatgacagagggcgatctacatatagcatggctagtgagtgcaccaatctgccttctcaccga tatccttgccgtcctcgtcgtatgccacttccggtcttacctacacggaacggatattgttgtcatctctcttatcgttt ccatggcagccaatgtagcagtccttattccactcccggccgcactaggactgacagaggaaacgtggactgcagacctt tgtagattctacatctggtttttcgtaatgctcagagtcgttcaattagtgcatacaacaatgttatcttttcattgggt atccgttttgaaactttcttctcaaaaaagtagtttttctacaactttttcagtgaaaatgtccgttcccatcacgtggg ttttggcgggaattgtaggtctattgccaatcattggggacgttccgaatgacttcagtcaccagggacagtgcaaatat tttgtttttgacctttctgttggattaggaatatttatgataattttctctctcgtctgtttaataacatcactttgcag tgctattgatgccatggttattctacaatatgtcagacgcgtagcagctagaaagtatggcacagcaaatctctacatcc caagaaaggaaccggaaattgccggtggatacaccatccatgagcgctacagccaacttaactttgcctgtgacatgtgt cgtctgattcttgtcaccatagctacgtcttactgcatcaatcacatgccatatttggttatgcagttcctgcagatatc aggccaaggtaacagagagttattccagcacattatgttaagcctaaccttggtagagtcgttggtcattccacatatcc tgtggctgaccagtaagcgatatcgtcacgccctgcagtacttgtggagagagaaattactcaggaaaccgggagagagc gaggaagatccatcctcatgtactctccagtcttacaagagaagaatcaaacgtaacagtgttactacgaatcttaatac atcagaagtgtcagtacagaggtccccaacaagtgcgacacgagacgttcaggctaaattaagaccatcatccgggactt ctgagtacgcagaaattctcaaacaaggcaccaatggtgaaacggagcgaccgatgagttcagatattaccgtgacgaca gtagatttgttaaatgttggcagcattaaaaacattgatcagaagatgcatgcacgtgatcttaaaagaagcttgtctgg aagttcaaggaacgaatggaaggagcagatgagaaggaaacacttgccagctatctttgtcaacgaagcgtttgattcaa cagatgtctctacaacaagagatggggtcgagcagcctaagcctcccgtgaaacaagacatggacaattctagtctgcac tctatgtactactatatgtcaagtgattatcacccggactaccttaatacagatagtctgccaagacatgcacatatcca gattcataagtccgaggttgcagatgtctcgagttggcaaaggaacatagggaaagaaatctccgagaaaactcagcaga gaaattatcacacatccgagcatctgtatagagcgcgcatgcatgattatccaactgagaatagtagtttgcctagaaag aaagtacccaggatgggaacaaagtgccctgattccggtagcagcagtagcatatacagcaaaactcattcaagatcaac tagtgagaattcacttcagattaagaaacatcacagaagtgcaagtgattttgtgccttacgggtttgcaaaccttcgaa gtgttgggccttcttcaaaacgaagtctttcatgtgaagagaaagagacggacaatttttcttatatgtgctcgtcccag agtttgaaggatatacggaattttaactattattcttattcaaatcaaactacttttaccgatcgtcgccttctgtacat tcaaagaaaagggagcatagactccgatgaactacatagtggtgcaaactttcccttgagacaagatagcgaaagaagcg aaagcgaggctgcgagtgctaagtacaacgaaagcgatatagaaatggtgctaggaaacagtgagaaatatcataatagt gaaactagagaagacaggtcggaaaaatctattttagagcatagtgattgtcactttaacggccagtcatctgcagataa accacaaatgctccatcgacaacactcttttaatgatttagaggacaacaaagatacagtttcaaatacaatctacaatg gcgaaaatcgtatttatgcgaattataattataattgtgatgcccaggacgttgaaacatgtgactctgcaaatttggat gcaagagaaagagggaacggtatccacttcgagaaagcggtttctttagatttggggttgaattcaacttacatggagga taatatgcacaatactgacgaaaagaaaggcgattcggtaacttattccaactttgcaaatgattcggaggaacaattta gcgacaaatattctgaaattggtaactatgcagctatatccatatccccgagggtggacatgggtgagtctgtaacccca atgtatgaagatttgaatgaaatagacaaaggttttgaggatgcactgaacgcaagttatacgagcagggaaagtcttgg aagtgcagatgggataaactacgattctatatcggatagtccaatcaacgaaagtgatcccttcagtaattcagatcaca caagttctgacgaatttagaacagaagctattgtttatagatcattaagccgtgcatccattggtcctggagaattcgaa tcaccggataatagtcaccaaaatttgaatgacgtatatgcagtcacaggtgattatggaattaccaataattttgaatc aaatacgtcagcgtcagcgtcaccctggcctgaatgcaaaggaccaatcaaaaactctgacttgaattttgaaaatcact ttgacgatactgcctttgaatcgccaggattatctacaaagactgtctcttcgcatcattctgatctgaagcaagatatt gatcccgtctacttctaa |
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Protein
| Protein ID | pfu_aug2.0_2.1_06717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2.1_06717.t1 MTSLSTMTEGDLHIAWLVSAPICLLTDILAVLVVCHFRSYLHGTDIVVISLIVSMAANVAVLIPLPAALGLTEETWTADL CRFYIWFFVMLRVVQLVHTTMLSFHWVSVLKLSSQKSSFSTTFSVKMSVPITWVLAGIVGLLPIIGDVPNDFSHQGQCKY FVFDLSVGLGIFMIIFSLVCLITSLCSAIDAMVILQYVRRVAARKYGTANLYIPRKEPEIAGGYTIHERYSQLNFACDMC RLILVTIATSYCINHMPYLVMQFLQISGQGNRELFQHIMLSLTLVESLVIPHILWLTSKRYRHALQYLWREKLLRKPGES EEDPSSCTLQSYKRRIKRNSVTTNLNTSEVSVQRSPTSATRDVQAKLRPSSGTSEYAEILKQGTNGETERPMSSDITVTT VDLLNVGSIKNIDQKMHARDLKRSLSGSSRNEWKEQMRRKHLPAIFVNEAFDSTDVSTTRDGVEQPKPPVKQDMDNSSLH SMYYYMSSDYHPDYLNTDSLPRHAHIQIHKSEVADVSSWQRNIGKEISEKTQQRNYHTSEHLYRARMHDYPTENSSLPRK KVPRMGTKCPDSGSSSSIYSKTHSRSTSENSLQIKKHHRSASDFVPYGFANLRSVGPSSKRSLSCEEKETDNFSYMCSSQ SLKDIRNFNYYSYSNQTTFTDRRLLYIQRKGSIDSDELHSGANFPLRQDSERSESEAASAKYNESDIEMVLGNSEKYHNS ETREDRSEKSILEHSDCHFNGQSSADKPQMLHRQHSFNDLEDNKDTVSNTIYNGENRIYANYNYNCDAQDVETCDSANLD ARERGNGIHFEKAVSLDLGLNSTYMEDNMHNTDEKKGDSVTYSNFANDSEEQFSDKYSEIGNYAAISISPRVDMGESVTP MYEDLNEIDKGFEDALNASYTSRESLGSADGINYDSISDSPINESDPFSNSDHTSSDEFRTEAIVYRSLSRASIGPGEFE SPDNSHQNLNDVYAVTGDYGITNNFESNTSASASPWPECKGPIKNSDLNFENHFDDTAFESPGLSTKTVSSHHSDLKQDI DPVYF |
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