Gene
| Gene Model ID | pfu_aug2.0_201.1_03785 |
|---|---|
| Locus | scaffold201.1 : 95396 ... 108169 : + |
| To GenomeBrowser | scaffold201.1:95396..108169 |
| Genes list of scaffold | scaffold201.1 |
| Synonym | pfu_aug1.0_53978.1_05544 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-dependent -nad h-hydrate dehydratase isoform x3 | GO:0005524 GO:0005739 GO:0046496 GO:0047453 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_201.1_03785.t1 | 1 | 1 | Carb_kinase | 37 | 126 | 9.0e-23 | 80.8 | 7.6e-27 | 1.1e-22 | 80.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_201.1_03785.t1 | gi|741887544|ref|XP_010820593.1| | PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X3 [Bos taurus] | 0.0 |
| pfu_aug2.0_201.1_03785.t1 | gi|548488943|ref|XP_005687838.1| | PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Capra hircus] | 0.0 |
| pfu_aug2.0_201.1_03785.t1 | gi|594049664|ref|XP_006049200.1| | PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_201.1_03785.t1 | gi|297481337|ref|XP_002692037.1| | PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Bos taurus] | 0.0 |
| pfu_aug2.0_201.1_03785.t1 | gi|119904968|ref|XP_869576.2| | PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 [Bos taurus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_201.1_03785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_201.1_03785.t1 atgagtgccagccatgcaagctacatcaagcctggaatcgtcctggacatggtcaagtccattatacctgaactgaccac tgacctgcacaaaggcatgatgggaagggtcgtggtggtaggaggatgcaaggagtatacaggtgcaccatattatgctg ccatttcttccctgaaattgggtgcagatttatcccatgtgttctgtacggaggcctctgctccagtgattaaatcctac agcccagaactcattgtacaccctatattagatcacagtgatgtagagacagaggcagatcagtggttggctcgtatgca tgctgtagtagtaggtcctggcctgggcagggataaaaccatcctagaacatgccaagataattcttaaattttcttcaa gaatgtatagagttggaacccttcgacattactattataagaccagaccatttgctaaccacagctag |
|
Protein
| Protein ID | pfu_aug2.0_201.1_03785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_201.1_03785.t1 MSASHASYIKPGIVLDMVKSIIPELTTDLHKGMMGRVVVVGGCKEYTGAPYYAAISSLKLGADLSHVFCTEASAPVIKSY SPELIVHPILDHSDVETEADQWLARMHAVVVGPGLGRDKTILEHAKIILKFSSRMYRVGTLRHYYYKTRPFANHS |
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