Gene
| Gene Model ID | pfu_aug2.0_201.1_03791 |
|---|---|
| Locus | scaffold201.1 : 373663 ... 409990 : + |
| To GenomeBrowser | scaffold201.1:373663..409990 |
| Genes list of scaffold | scaffold201.1 |
| Synonym | pfu_aug1.0_84646.1_49322 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_201.1_03791.t2 | 4 | 1 | TPR_12 | 41 | 58 | 8.4e-07 | 28.8 | 0.05 | 39.0 | 4.2 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 1 | SNF2_N | 131 | 183 | 8.3e-32 | 110.1 | 2.0 | 1500.0 | -2.4 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 2 | TPR_12 | 134 | 169 | 8.4e-07 | 28.8 | 0.0061 | 4.7 | 7.2 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 2 | SNF2_N | 254 | 301 | 8.3e-32 | 110.1 | 1.4 | 1100.0 | -1.9 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 3 | TPR_12 | 262 | 322 | 8.4e-07 | 28.8 | 4.7e-06 | 0.0037 | 17.1 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 4 | TPR_12 | 393 | 414 | 8.4e-07 | 28.8 | 0.057 | 44.0 | 4.1 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 3 | SNF2_N | 462 | 530 | 8.3e-32 | 110.1 | 1.6e-21 | 1.2e-18 | 66.9 |
| pfu_aug2.0_201.1_03791.t2 | 4 | 4 | SNF2_N | 575 | 732 | 8.3e-32 | 110.1 | 2.3e-16 | 1.8e-13 | 49.9 |
| pfu_aug2.0_201.1_03791.t2 | 2 | 1 | HDA2-3 | 654 | 697 | 8.1e-09 | 34.7 | 0.096 | 75.0 | 1.9 |
| pfu_aug2.0_201.1_03791.t2 | 2 | 2 | HDA2-3 | 773 | 925 | 8.1e-09 | 34.7 | 3.0e-10 | 2.4e-07 | 29.8 |
| pfu_aug2.0_201.1_03791.t2 | 1 | 1 | Helicase_C | 817 | 894 | 1.3e-13 | 50.6 | 3.3e-16 | 2.6e-13 | 49.6 |
Transcript
| Transcript ID | pfu_aug2.0_201.1_03791.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_201.1_03791.t1 atggaggtagacaaagaaaatgcctctcctgagggctcgggtaacacgcctgcacagttaacaaaaatggatcaaatgaa attcatgtcgttaatgaccaaggccaaaaaactgaccagtaatgggcatgtggctgaagctttggacttgtacaagaaag cccagaaaatctgctacagtgaaaaattacagagcagaatccaaaaaatggagatatttttagcgaggaaatccgttcaa ggtgatcaacctgaggctgttaatgacgcccaaaaccacgctgcaaactgtgaagatgtagaaatgagcactcctaaaaa gccattagccagtgctgaaaatcaaagaccactgatatcccagtctacaccagctgtgaacggagatgaagtggatgatg agaataaagctgtttatttatcgttggtggcggaggccaaacgtttgatcaaggaggaaaacatctcacaggccctggaa atgtataagaaagctgccgagatttatagtggagaaaaactgctgagaaaaatagttcaaatggaggaatatttggctgt aaaatcagcgtctagtatcactgaaaatcattcatcatcaaacaatggagatatagaaatgtcaactccagtaaaaagcc tagtgcaaaaggaagggaatcgaccactgatatcccagtctacaccagctgtgaacggagatgaagtggatgatgagaat aaagctgtttatttatcgttggtggcggaggccaaacgtttgatcaaggaggaaaatatctcacaggccctggaaatgta taagaaagccgcggagatttataacaagggaagtaaatctgccagtgaattgacggcagaagatcatcaaaggttcaaca acttggtgaagaaagccaagcagttcgctacggaagggaacgtgcacgaagctctgaacctaaacaagcaagctttacag atatattacacagagaagctggaacacaggatcaagaaaatggaggaatacctacggcaacatggagcagtttatgataa cactgaaggaaaacctgaaaatgaacagggagagaaagctttacgcacccctaaatcggccaaaaagaagtcttccactg acgtagatactgatgatcagaggaaattcaatgatttggtgatgaaggcaaagcgacttgctcaggatggtaacataacg gaggcgttagacgtaaacagacaggctctaaaaatacattatagtgagaaactacagaaaaggattgctaaaatggagga gtacctgaaaaatgaagatgaggaagaagaagaagacagtggtatgattgatttaggacacaactttttcctgtacaagg acctcgcggacaaactgtatgctcatcagagagaaggagtgctgtggatgtggggacttcatgtgaaacggaaaggaggg atactgggtgacgatatgggattggggaagaccatccaggtgattgcctttctgtcaggcctgtttgacatggataaggt taaatctgtactcatcgtgatgcctgtgtcagtcatagtcaactgggagaaggagttctcaagatggtgtgtcattgcac tttgttgcgctctatcaatattccccacgcttaccaaggtctctaacgatcctcacaactcgatggcatgctctctcgcg ttctctatgattctatcgaatcgtagacatcgtggtgatcggactcccatacaaaacaatctcagggagttatggtcctt gtttgattttgtacaccagggatctttgttgggtacttccaggaccttcaaaatggagtttgaaaatccaataactcggg ccagggaaagagatgccactgcaggggagagaaaactgggaatggaaatggcagagagtcttaagaaaatcatcgcaccc tacttcctacggagaaccaaggcagaagttacggagaaaggaatcaagaaagagaacagtgaaaatccagaggataagaa agaaaagcatctgactaaaatgccatcactgacgaggaagaatgatttcatcgtatggctattcctgactcccacacagc agagaatttactcagattttctctccctcgatcatgtgaaggagcttttgatgaccaagaagtcaccactggtagcctta acagtactgaaaaagatctgtgatcaccccagacttctctcaagacgaggttgtgcacagttaggtctggatggagatca tagacttgacgagttagaccctgactctgaggaaggcttagagtgtgcagccaatcaaattaaagacgtcgctgacgaaa tcttgatcggagagtcgggaaaggtgatcgtagttgttgatctactggacaagatgaaagaagaggggcatagatgcctg gtgttctcacagtctcggaaaatgttggatgtcatcgaacaagttataaagaataggggccataaagtgatgagactgga tggtacggtaacacagcttgccgagagagacgctagaatcgggaaatttcagaacgacacatcatattctgttttcttac taaccacacaggttgggggagtgggacttacacttactgcagcagacagagttatcatttttgatccgagttggaaccca gccacggatgctcaggctgtagacagagtgtttaggattggacaagacaaaaatgtcgttatttaccgtctaattacctg cggtacggtggaagaaaagatctacagacgacaaatcttcaaagattcaatcacacgtcaaaccaccggaaattctaaga acccatacagggcttga |
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| Transcript ID | pfu_aug2.0_201.1_03791.t2 |
| Definition | - |
>pfu_aug2.0_201.1_03791.t2 atggaggtagacaaagaaaatgcctctcctgagggctcgggtaacacgcctgcacagttaacaaaaatggatcaaatgaa attcatgtcgttaatgaccaaggccaaaaaactgaccagtaatgggcatgtggctgaagctttggacttgtacaagaaag cccagaaaatctgctacagtgaaaaattacagagcagaatccaaaaaatggagatatttttagcgaggaaatccgttcaa ggtgatcaacctgaggctgttaatgacgcccaaaaccacgctgcaaactgtgaagatgtagaaatgagcactcctaaaaa gccattagccagtgctgaaaatcaaagaccactgatatcccagtctacaccagctgtgaacggagatgaagtggatgatg agaataaagctgtttatttatcgttggtggcggaggccaaacgtttgatcaaggaggaaaacatctcacaggccctggaa atgtataagaaagctgccgagatttatagtggagaaaaactgctgagaaaaatagttcaaatggaggaatatttggctgt aaaatcagcgtctagtatcactgaaaatcattcatcatcaaacaatggagatatagaaatgtcaactccagtaaaaagcc tagtgcaaaaggaagggaatcgaccactgatatcccagtctacaccagctgtgaacggagatgaagtggatgatgagaat aaagctgtttatttatcgttggtggcggaggccaaacgtttgatcaaggaggaaaatatctcacaggccctggaaatgta taagaaagccgcggagatttataacaagggaagtaaatctgccagtgaattgacggcagaagatcatcaaaggttcaaca acttggtgaagaaagccaagcagttcgctacggaagggaacgtgcacgaagctctgaacctaaacaagcaagctttacag atatattacacagagaagctggaacacaggatcaagaaaatggaggaatacctacggcaacatggagcagtttatgataa cactgaaggaaaacctgaaaatgaacagggagagaaagctttacgcacccctaaatcggccaaaaagaagtcttccactg acgtagatactgatgatcagaggaaattcaatgatttggtgatgaaggcaaagcgacttgctcaggatggtaacataacg gaggcgttagacgtaaacagacaggctctaaaaatacattatagtgagaaactacagaaaaggattgctaaaatggagga gtacctgaaaaatgaagatgaggaagaagaagaagacagtggtatgattgatttaggacacaactttttcctgtacaagg acctcgcggacaaactgtatgctcatcagagagaaggagtgctgtggatgtggggacttcatgtgaaacggaaaggaggg atactgggtgacgatatgggattggggaagaccatccaggtgattgcctttctgtcaggcctgtttgacatggataaggt taaatctgtactcatcgtgatgcctgtgtcagtcatagtcaactgggagaaggagttctcaagatggtgtgtcattgcac tttgttgcgctctatcaatattccccacgcttaccaaggtctctaacgatcctcacaactcgatggcatgctctctcgcg ttctctatgattctatcgaatcgtagacatcgtggtgatcggactcccatacaaaacaatctcagggagttatggtcctt gtttgattttgtacaccagggatctttgttgggtacttccaggaccttcaaaatggagtttgaaaatccaataactcggg ccagggaaagagatgccactgcaggggagagaaaactgggaatggaaatggcagagagtcttaagaaaatcatcgcaccc tacttcctacggagaaccaaggcagaagttacggagaaaggaatcaagaaagagaacagtgaaaatccagaggataagaa agaaaagcatctgactaaaatgccatcactgacgaggaagaatgatttcatcgtatggctattcctgactcccacacagc agagaatttactcagattttctctccctcgatcatgtgaaggagcttttgatgaccaagaagtcaccactggtagcctta acagtactgaaaaagatctgtgatcaccccagacttctctcaagacgaggttgtgcacagttaggtctggatggagatca tagacttgacgagttagaccctgactctgaggaaggcttagagtgtgcagccaatcaaattaaagacgtcgctgacgaaa tcttgatcggagagtcgggaaaggtgatcgtagttgttgatctactggacaagatgaaagaagaggggcatagatgcctg gtgttctcacagtctcggaaaatgttggatgtcatcgaacaagttataaagaataggggccataaagtgatgagactgga tggtacggtaacacagcttgccgagagagacgctagaatcgggaaatttcagaacgacacatcatattctgttttcttac taaccacacaggttgggggagtgggacttacacttactgcagcagacagagttatcatttttgatccgagttggaaccca gccacggatgctcaggctgtagacagagtgtttaggattggacaagacaaaaatgtcgttatttaccgtctaattacctg cggtacggtggaagaaaagatctacagacgacaaatcttcaaagattcaatcacacgtcaaaccaccggaaattctaaga acccatacagcgttcctgaatccatttgttcttcattcattctccagttttccaggttttctagtttgagattgattcgt catacgagcagaatgaaatcgtacgttatcatcatgacgtcacctatttacgatatatcgtttatcgataaatctactca taaccaatcgggaaatactgagacagaaagaatccctgataacaataaatgggtcaacctttggcagttcattactttga ggaagtag |
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Protein
| Protein ID | pfu_aug2.0_201.1_03791.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_201.1_03791.t1 MEVDKENASPEGSGNTPAQLTKMDQMKFMSLMTKAKKLTSNGHVAEALDLYKKAQKICYSEKLQSRIQKMEIFLARKSVQ GDQPEAVNDAQNHAANCEDVEMSTPKKPLASAENQRPLISQSTPAVNGDEVDDENKAVYLSLVAEAKRLIKEENISQALE MYKKAAEIYSGEKLLRKIVQMEEYLAVKSASSITENHSSSNNGDIEMSTPVKSLVQKEGNRPLISQSTPAVNGDEVDDEN KAVYLSLVAEAKRLIKEENISQALEMYKKAAEIYNKGSKSASELTAEDHQRFNNLVKKAKQFATEGNVHEALNLNKQALQ IYYTEKLEHRIKKMEEYLRQHGAVYDNTEGKPENEQGEKALRTPKSAKKKSSTDVDTDDQRKFNDLVMKAKRLAQDGNIT EALDVNRQALKIHYSEKLQKRIAKMEEYLKNEDEEEEEDSGMIDLGHNFFLYKDLADKLYAHQREGVLWMWGLHVKRKGG ILGDDMGLGKTIQVIAFLSGLFDMDKVKSVLIVMPVSVIVNWEKEFSRWCVIALCCALSIFPTLTKVSNDPHNSMACSLA FSMILSNRRHRGDRTPIQNNLRELWSLFDFVHQGSLLGTSRTFKMEFENPITRARERDATAGERKLGMEMAESLKKIIAP YFLRRTKAEVTEKGIKKENSENPEDKKEKHLTKMPSLTRKNDFIVWLFLTPTQQRIYSDFLSLDHVKELLMTKKSPLVAL TVLKKICDHPRLLSRRGCAQLGLDGDHRLDELDPDSEEGLECAANQIKDVADEILIGESGKVIVVVDLLDKMKEEGHRCL VFSQSRKMLDVIEQVIKNRGHKVMRLDGTVTQLAERDARIGKFQNDTSYSVFLLTTQVGGVGLTLTAADRVIIFDPSWNP ATDAQAVDRVFRIGQDKNVVIYRLITCGTVEEKIYRRQIFKDSITRQTTGNSKNPYRA |
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| Protein ID | pfu_aug2.0_201.1_03791.t2 |
| Definition | - |
>pfu_aug2.0_201.1_03791.t2 MEVDKENASPEGSGNTPAQLTKMDQMKFMSLMTKAKKLTSNGHVAEALDLYKKAQKICYSEKLQSRIQKMEIFLARKSVQ GDQPEAVNDAQNHAANCEDVEMSTPKKPLASAENQRPLISQSTPAVNGDEVDDENKAVYLSLVAEAKRLIKEENISQALE MYKKAAEIYSGEKLLRKIVQMEEYLAVKSASSITENHSSSNNGDIEMSTPVKSLVQKEGNRPLISQSTPAVNGDEVDDEN KAVYLSLVAEAKRLIKEENISQALEMYKKAAEIYNKGSKSASELTAEDHQRFNNLVKKAKQFATEGNVHEALNLNKQALQ IYYTEKLEHRIKKMEEYLRQHGAVYDNTEGKPENEQGEKALRTPKSAKKKSSTDVDTDDQRKFNDLVMKAKRLAQDGNIT EALDVNRQALKIHYSEKLQKRIAKMEEYLKNEDEEEEEDSGMIDLGHNFFLYKDLADKLYAHQREGVLWMWGLHVKRKGG ILGDDMGLGKTIQVIAFLSGLFDMDKVKSVLIVMPVSVIVNWEKEFSRWCVIALCCALSIFPTLTKVSNDPHNSMACSLA FSMILSNRRHRGDRTPIQNNLRELWSLFDFVHQGSLLGTSRTFKMEFENPITRARERDATAGERKLGMEMAESLKKIIAP YFLRRTKAEVTEKGIKKENSENPEDKKEKHLTKMPSLTRKNDFIVWLFLTPTQQRIYSDFLSLDHVKELLMTKKSPLVAL TVLKKICDHPRLLSRRGCAQLGLDGDHRLDELDPDSEEGLECAANQIKDVADEILIGESGKVIVVVDLLDKMKEEGHRCL VFSQSRKMLDVIEQVIKNRGHKVMRLDGTVTQLAERDARIGKFQNDTSYSVFLLTTQVGGVGLTLTAADRVIIFDPSWNP ATDAQAVDRVFRIGQDKNVVIYRLITCGTVEEKIYRRQIFKDSITRQTTGNSKNPYSVPESICSSFILQFSRFSSLRLIR HTSRMKSYVIIMTSPIYDISFIDKSTHNQSGNTETERIPDNNKWVNLWQFITLRK |
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