Gene
Gene Model ID | pfu_aug2.0_2015.1_18643 |
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Locus | scaffold2015.1 : 6336 ... 19925 : - |
To GenomeBrowser | scaffold2015.1:6336..19925 |
Genes list of scaffold | scaffold2015.1 |
Synonym | pfu_aug1.0_2813.1_59036 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
ubiquitin carboxyl-terminal hydrolase partial | GO:0004843 GO:0005622 GO:0006511 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2015.1_18643.t1 | 1 | 1 | Peptidase_C12 | 12 | 190 | 0.0 | 186.2 | 0.0 | 0.0 | 185.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2015.1_18643.t1 | gi|675869044|ref|XP_009020082.1| | hypothetical protein HELRODRAFT_188801 [Helobdella robusta] | 0.0 |
pfu_aug2.0_2015.1_18643.t1 | gi|704251808|ref|XP_010148159.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Eurypyga helias] | 0.0 |
pfu_aug2.0_2015.1_18643.t1 | gi|701403610|ref|XP_009969514.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Tyto alba] | 0.0 |
pfu_aug2.0_2015.1_18643.t1 | gi|698404871|ref|XP_009809756.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase BAP1, partial [Gavia stellata] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_2015.1_18643.t1 |
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Definition | - |
>pfu_aug2.0_2015.1_18643.t1 atgattttacggcaccaagaaggttccccaattaaccttgtacatcaatttggtgtaaaaggtgtacaggttgaagaaat ctatgatttgcagaaaactatagatggcccagtgtatggattcattttcttgtttcggtggatagaagaaaggaggagta gaaggaagacaacaacagaggatgaatcatttgtccaggatcaacaagttgtcaataagatcttcttcgctcagcaggtg atacctaactcgtgtgctacacatgcattattgagtgtgctcctgaactgtgatgacagagttaaacttggatctacgtt atcacagctgaaagaattctcaaagaacatgagtccagaggacaaaggtgtggccatagggaacatgccagagctggccg ccgcccataacagccacgccagacctgagccacgacatcccccagaaaaacagcaaggattaacaacagctcgaaccatg gaggctttccactttgttagttatgttcctatagaaggcagactgtatgagttagatggtctgaagccttatcccataga ccatgcaagtgcctataaactccgaccttga |
Protein
Protein ID | pfu_aug2.0_2015.1_18643.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2015.1_18643.t1 MILRHQEGSPINLVHQFGVKGVQVEEIYDLQKTIDGPVYGFIFLFRWIEERRSRRKTTTEDESFVQDQQVVNKIFFAQQV IPNSCATHALLSVLLNCDDRVKLGSTLSQLKEFSKNMSPEDKGVAIGNMPELAAAHNSHARPEPRHPPEKQQGLTTARTM EAFHFVSYVPIEGRLYELDGLKPYPIDHASAYKLRP |