Gene
| Gene Model ID | pfu_aug2.0_2015.1_18649 |
|---|---|
| Locus | scaffold2015.1 : 101496 ... 120183 : + |
| To GenomeBrowser | scaffold2015.1:101496..120183 |
| Genes list of scaffold | scaffold2015.1 |
| Synonym | pfu_aug1.0_74590.1_13160 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| otu domain-containing | GO:0004843 GO:0005829 GO:0032480 GO:0032496 GO:0045087 GO:0070536 GO:0071108 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2015.1_18649.t1 | 2 | 1 | OTU | 173 | 283 | 2.3e-18 | 66.9 | 4.6e-22 | 2.3e-18 | 66.9 |
| pfu_aug2.0_2015.1_18649.t1 | 2 | 2 | OTU | 316 | 339 | 2.3e-18 | 66.9 | 0.57 | 2800.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2015.1_18649.t1 | gi|241752311|ref|XP_002401039.1| | OTU domain-containing protein, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_2015.1_18649.t1 | gi|675879276|ref|XP_009025194.1| | hypothetical protein HELRODRAFT_68163 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_2015.1_18649.t1 | gi|569008838|ref|XP_006527730.1| | PREDICTED: OTU domain-containing protein 5 isoform X4 [Mus musculus] | 0.0 |
| pfu_aug2.0_2015.1_18649.t1 | gi|594542517|ref|NP_001277466.1| | OTU domain-containing protein 5 isoform 3 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2015.1_18649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2015.1_18649.t1 atgacaattttaccgaagaaaaagccaactaaagacaaaaatgaaggtgaaagtaacgagcatcaaatgggacactcggg tcattcgcaccaacaccaccaatctgcgacggattctcgtcacgagaaggcaacaaggtcacggaactcgccgactaggt ggcttccatcaacaacaagggaagagaagttggccagtcatgaccccggtggctcgtttgaaggtcatgaaggtgctaca agccaacacaaaaggcgtcatagatcctctccccatagaaatcatgtccgtaaacaccgtgggcatgtccaaacgcccca tacatctgcagccccgccctctcccccggtggattatggtgcaaccaatacggagtatgaagaaactggttacaacagcg aggatgagtatgtggcgccaccatccaggccggacaacgtcaatgtggatgagctggaagtgcggtttgaagaggcactt aaagagaaaaaaggctgggttataaagaagatgggagaggatggagcgtgcctcttcagggctgttgctgaccaggttta tggtgatcaagagatgcatggagtgataaggaaacactgtgtggactatatgcggaagaattcagactattactcccatt atgtaactgaggatttcactacgtatcttaatcgtaaaatgactgagcattgccatggaaaccatgtagaaattcaggca ataagtgagatgtttaacagaccagtggaagtctaccagtatagtatagaacctataaacacctttacatgttcatacaa aacggaagatgaaccaatacgtatcagttatcatcgtaatgtacattataactcagtggtggatccatataaagctacaa taggtgtggggctcgggctaccaggatttcaaccaggacttgctgataaaaacctgatgcatgatgctgtgagacaatcg gaggatacgcacattgaacagtgtatgttagaggacaagttaaaagagacggactgggaggtgacccaggagtcaataga agaacaggtggctcgggaatcttatctacaatggctcagggataacgaagtctcagcaaggagacataactctactcgtt cagccagtgccacatgtagttcatccgctgatagtatgtacaaggatctaggatctcctgagacaaagcaggggagatca ccgcgtagtaggagtaacccagcgtccggacagaatagtccccagagggtagagagtgtagaccagaactccccaaggcc tacgggctcaggcactaatatgtcagtatctccattacacttccttggtgagagcagcttggttggggctacaggaggga cctcacctaaacaaccaatggtcactgacaatccattctcagaaacatcctctctcatgaaccaatttgatccctctttt ctag |
|
Protein
| Protein ID | pfu_aug2.0_2015.1_18649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2015.1_18649.t1 MTILPKKKPTKDKNEGESNEHQMGHSGHSHQHHQSATDSRHEKATRSRNSPTRWLPSTTREEKLASHDPGGSFEGHEGAT SQHKRRHRSSPHRNHVRKHRGHVQTPHTSAAPPSPPVDYGATNTEYEETGYNSEDEYVAPPSRPDNVNVDELEVRFEEAL KEKKGWVIKKMGEDGACLFRAVADQVYGDQEMHGVIRKHCVDYMRKNSDYYSHYVTEDFTTYLNRKMTEHCHGNHVEIQA ISEMFNRPVEVYQYSIEPINTFTCSYKTEDEPIRISYHRNVHYNSVVDPYKATIGVGLGLPGFQPGLADKNLMHDAVRQS EDTHIEQCMLEDKLKETDWEVTQESIEEQVARESYLQWLRDNEVSARRHNSTRSASATCSSSADSMYKDLGSPETKQGRS PRSRSNPASGQNSPQRVESVDQNSPRPTGSGTNMSVSPLHFLGESSLVGATGGTSPKQPMVTDNPFSETSSLMNQFDPSF L |
|