Gene
| Gene Model ID | pfu_aug2.0_202.1_07143 |
|---|---|
| Locus | scaffold202.1 : 20545 ... 49115 : - |
| To GenomeBrowser | scaffold202.1:20545..49115 |
| Genes list of scaffold | scaffold202.1 |
| Synonym | pfu_aug1.0_8535.1_67891 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| substance-p receptor | GO:0004930 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_202.1_07143.t1 | 2 | 1 | 7TM_GPCR_Srsx | 55 | 95 | 1.2e-10 | 40.9 | 2.4e-09 | 1.2e-05 | 24.6 |
| pfu_aug2.0_202.1_07143.t1 | 2 | 1 | 7tm_1 | 60 | 95 | 8.0e-23 | 80.8 | 4.3e-13 | 2.1e-09 | 36.9 |
| pfu_aug2.0_202.1_07143.t1 | 2 | 2 | 7TM_GPCR_Srsx | 140 | 215 | 1.2e-10 | 40.9 | 7.5e-08 | 0.00037 | 19.7 |
| pfu_aug2.0_202.1_07143.t1 | 2 | 2 | 7tm_1 | 141 | 200 | 8.0e-23 | 80.8 | 2.4e-16 | 1.2e-12 | 47.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_202.1_07143.t1 | gi|403183160|gb|EAT36931.2| | 0.0 | |
| pfu_aug2.0_202.1_07143.t1 | gi|676496331|ref|XP_009067184.1| | hypothetical protein LOTGIDRAFT_92844, partial [Lottia gigantea] | 1.0e-32 |
| pfu_aug2.0_202.1_07143.t1 | gi|242009231|ref|XP_002425394.1| | class A rhodopsin-like G-protein coupled receptor GPRllk, putative [Pediculus humanus corporis] | 4.0e-31 |
| pfu_aug2.0_202.1_07143.t1 | gi|242003323|ref|XP_002422695.1| | class A rhodopsin-like G-protein coupled receptor GPRnna12, putative [Pediculus humanus corporis] | 9.0e-30 |
| pfu_aug2.0_202.1_07143.t1 | gi|350414041|ref|XP_003490188.1| | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_202.1_07143.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07143.t1 atggatgactatacatacaccagtggttactatgatggtaactggtcatataacagtacatactatgataatctgtacct agatgatgaccatgaggacggtctgtactatgtgccaccaggcatcatcgttttactcgcattcctatacggctctatct cactcattgccgtttttggcaacggattagttatactggtcattgccaaaaacaagaaaatgcaaacagtaaccaacatc ctgatcgcaaatctagcgttggctgacgtcatcatcnttctcactcacaatagagcaccaaagaattacacaaaacacaa acctgaattgactacatctacatttaagctacttgtgtgtgtacccagcaaacaaggcttactctccccaggccagtacc tgatcttacactctgtcttggtggttaagatgctgatcatcgtagtatgcctgtttgttttatgctggttaccgttccat gtctacaactttctatctgagctgtacccggacattaatttgtacaaatacatcaacatcatatggttttgtttcaattg gttggcgatgtccaactcttgttataaccctttcatttatggcttgcttaacgaaaaatttaagagagaatatagacggt tatttagactttgccatgacaggaaacggaagtaccaggatcctgatttggcagactattcagacgacagtgcctcgcct tcacagagaggaagtcttcttctaaacggaaaggaaatgattcattcaaacggacgtgtagtcagtttccgaataaagaa atatcccgcggacagaggaaccggaagttcatatgtgtag |
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Protein
| Protein ID | pfu_aug2.0_202.1_07143.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07143.t1 MDDYTYTSGYYDGNWSYNSTYYDNLYLDDDHEDGLYYVPPGIIVLLAFLYGSISLIAVFGNGLVILVIAKNKKMQTVTNI LIANLALADVIIXLTHNRAPKNYTKHKPELTTSTFKLLVCVPSKQGLLSPGQYLILHSVLVVKMLIIVVCLFVLCWLPFH VYNFLSELYPDINLYKYINIIWFCFNWLAMSNSCYNPFIYGLLNEKFKREYRRLFRLCHDRKRKYQDPDLADYSDDSASP SQRGSLLLNGKEMIHSNGRVVSFRIKKYPADRGTGSSYV |
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