Gene
| Gene Model ID | pfu_aug2.0_202.1_07148 |
|---|---|
| Locus | scaffold202.1 : 210385 ... 213909 : + |
| To GenomeBrowser | scaffold202.1:210385..213909 |
| Genes list of scaffold | scaffold202.1 |
| Synonym | pfu_aug1.0_1317.1_15430 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_202.1_07148.t1 | 1 | 1 | RVT_1 | 329 | 470 | 3.3e-12 | 46.2 | 2.6e-15 | 7.7e-12 | 45.0 |
| pfu_aug2.0_202.1_07148.t1 | 1 | 1 | rve | 747 | 850 | 8.7e-18 | 64.5 | 6.9e-21 | 2.1e-17 | 63.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_202.1_07148.t1 | gi|641654258|ref|XP_008179138.1| | PREDICTED: uncharacterized protein K02A2.6-like [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_202.1_07148.t1 | gi|752874170|ref|XP_011254394.1| | PREDICTED: uncharacterized protein K02A2.6-like [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_202.1_07148.t1 | gi|641651358|ref|XP_008190098.1| | PREDICTED: uncharacterized protein K02A2.6-like [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_202.1_07148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07148.t1 atgattcgtgatcgaatagtctttggcgtcacatccgagaaagttcgggagaagctaataaatgtagatgaagcacttac gttagacaaagctgtcgaaatcgctcaatcatatgaatactcgcaacagcaactgaagcagatgatgggagacgcacaca aaaacgaacaagccgtttccaaatggaaaggaaaacctccaggtagcagtcaccctaccgcatccagtaaaccgttatat caatgtacacagaatacaggtgcgcgtccgaaagagtaccaaaatgctaaacgttccagattccgtcaaaatggaggaaa caaggccaaagaaaaagaaaagaaaacctgcgaaagatgtggccgcaaccacaaaccaaccgacaagtgtccagcgatgg gtgaaatttgtgtaaagtgcaataagccaaatcatttcgctgtaatgtgcaaaagcaaaaatgttcatgatgtagaatca gatatgtcacatgcatatttatccgtagatgatgattcagattatgatgtctttattgattctgttgagtcaaagtcatg tcacaaattagttaatgatcaagcctttgtacatgttaaactaggaaatgcaaatgatttcaagtttaaagtggacacag gttcacaagtcaatatcttacctgagaatcaatatgagaaatactttggtcaacattatgcattggaggaatctgacctt aatctatatgcatacaatggtcattcattatcaccatctggttgtgtcactattccatgtacacatagcaatgttacgac tatgcttgaatttcaggttattgacactaagtcttaccccatcttaggactcagagcttgtttagatctgaaattagtta agttaacttacaatgtcgaagtgacaaatcggacagagcctttcacaaaggagaaggttctaaggaatcacgtgtctgtc ttcacagttgttgaaaaaccacactctggtaagctcagaatatgcttagaccctcgtgaccttaacaaggctataatcag acctcactacccaggcaaaacactagatgaagggttgcctcagctttccgaagctaaatatttcaccaaacttgatgcta ggtcaggctactggaccattaagctatcagaagcttcatcttatctcactacgttcaataccccttttggacgttatcgc tttctaaggctccctttcggactcaagtcttcacaagacgagtttcagaggaaaatggatgaagtgtttgaaggtctacc cggtgtcataactctggttgatgatattctagtgtttggtcacactcgtgaggaacacgaccaaaacctcacaatagcac tcaaacatgcactagagaaaggtctaaagttgaataaagacaaacttgaaaagaattctcaattcatatgggactcagct cagcaatcagcttttgacaaggtcaaagaagttatcacaacttccccagtacttgcatactttgatcataataagcccac gacactacaagtggatgcttcacagaaaggtcttggcgcaactcttatgcaagagggcaggccagttgcatttgcatcta aatctctaaccactagtgaacagaattacgctcaaatcgagaaagaaatgtatggaatactgttcggatgcaaacatttt aaccaatatctctatggtaccatcttgatgtgccaagtgtgccactttgtccctggtaaacaaataccagtagcagatac cctgtcaaggaaatcacttcctgacacttacccagaactttccaaaaatatggaagcccaagtgcacagtgtaattgcgc aacatggcataagtgaccagcgtttagaggacttaaggtcgtccacagccctaaatgagcaacttcaaagtctaaaaaag gtcatattacaaggatggccccatgagagaaggatgtgctcccctgaaacccttgagtattggaaccatagagatgaact cacatatgcagaaggtttcatcctgaagggtcagaagattgtaatacctcatgaccaaaggtcagaaattctaaggtcaa tacatacaggtcacctcggtatagacaaatgcctaaaatgtctattttggcccggtatgaattcagagataaccaaacta gtctcatcttgctctgtatgtcaagaacatagaaacacaaacctcaaggaacctatgattcctagtgtcaccccagacta cccttggcaaatagttgccacagatctattcacattggactgcaaagaacacatcatagttgtagactattacagtcgat actttgaagtcattgaactggcgagcacccaaagcaaggtcatcattcagaaacttaaaagtgtgtttgctcgttttggc atacctgagaaacttgtatcagacaatggaccacagtattcctcagctgaatttgcaaaggattacaactttcagcacac tacttcgagcccccactatgctcagtcaaatggactagcagaaagatgtgttcaaactgccaaaagaatcctcaaaaagg caaagattgaccaccaggacccctatctagccttgctagcctatcgcacaactccttcagagaatggctactcgccagct gaactattgcaaggtcgcattattcgcactacagtaccaatcttgcctagtcaattgttacccaggacaattaacattaa taaggtcaaggccaaacactatgacaaaggtgcttattcccttagaccacttgaagaaggagaatatgttagattccaac ttccagacaaaacctggaaacttgctacagtagtttga |
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Protein
| Protein ID | pfu_aug2.0_202.1_07148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07148.t1 MIRDRIVFGVTSEKVREKLINVDEALTLDKAVEIAQSYEYSQQQLKQMMGDAHKNEQAVSKWKGKPPGSSHPTASSKPLY QCTQNTGARPKEYQNAKRSRFRQNGGNKAKEKEKKTCERCGRNHKPTDKCPAMGEICVKCNKPNHFAVMCKSKNVHDVES DMSHAYLSVDDDSDYDVFIDSVESKSCHKLVNDQAFVHVKLGNANDFKFKVDTGSQVNILPENQYEKYFGQHYALEESDL NLYAYNGHSLSPSGCVTIPCTHSNVTTMLEFQVIDTKSYPILGLRACLDLKLVKLTYNVEVTNRTEPFTKEKVLRNHVSV FTVVEKPHSGKLRICLDPRDLNKAIIRPHYPGKTLDEGLPQLSEAKYFTKLDARSGYWTIKLSEASSYLTTFNTPFGRYR FLRLPFGLKSSQDEFQRKMDEVFEGLPGVITLVDDILVFGHTREEHDQNLTIALKHALEKGLKLNKDKLEKNSQFIWDSA QQSAFDKVKEVITTSPVLAYFDHNKPTTLQVDASQKGLGATLMQEGRPVAFASKSLTTSEQNYAQIEKEMYGILFGCKHF NQYLYGTILMCQVCHFVPGKQIPVADTLSRKSLPDTYPELSKNMEAQVHSVIAQHGISDQRLEDLRSSTALNEQLQSLKK VILQGWPHERRMCSPETLEYWNHRDELTYAEGFILKGQKIVIPHDQRSEILRSIHTGHLGIDKCLKCLFWPGMNSEITKL VSSCSVCQEHRNTNLKEPMIPSVTPDYPWQIVATDLFTLDCKEHIIVVDYYSRYFEVIELASTQSKVIIQKLKSVFARFG IPEKLVSDNGPQYSSAEFAKDYNFQHTTSSPHYAQSNGLAERCVQTAKRILKKAKIDHQDPYLALLAYRTTPSENGYSPA ELLQGRIIRTTVPILPSQLLPRTININKVKAKHYDKGAYSLRPLEEGEYVRFQLPDKTWKLATVV |
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