Gene
| Gene Model ID | pfu_aug2.0_202.1_07154 |
|---|---|
| Locus | scaffold202.1 : 368874 ... 369992 : - |
| To GenomeBrowser | scaffold202.1:368874..369992 |
| Genes list of scaffold | scaffold202.1 |
| Synonym | pfu_aug1.0_7.1_14648 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_202.1_07154.t1 | 2 | 1 | zf-C3HC4_3 | 14 | 62 | 1.9e-07 | 30.6 | 4.4e-10 | 1.9e-07 | 30.6 |
| pfu_aug2.0_202.1_07154.t1 | 3 | 1 | zf-RING_2 | 15 | 61 | 9.7e-08 | 31.7 | 2.3e-10 | 9.7e-08 | 31.7 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 1 | zf-C3HC4 | 16 | 60 | 6.7e-10 | 38.4 | 1.6e-12 | 6.7e-10 | 38.4 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 1 | zf-C3HC4_2 | 16 | 60 | 2.0e-08 | 34.1 | 4.8e-11 | 2.0e-08 | 34.1 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 1 | zf-RING_5 | 16 | 61 | 6.8e-07 | 28.9 | 1.6e-09 | 6.8e-07 | 28.9 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 1 | zf-RING_UBOX | 16 | 58 | 4.6e-06 | 26.2 | 1.1e-08 | 4.6e-06 | 26.2 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 2 | zf-RING_UBOX | 57 | 62 | 4.6e-06 | 26.2 | 1.6 | 670.0 | 0.1 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 2 | zf-C3HC4_3 | 98 | 134 | 1.9e-07 | 30.6 | 0.17 | 73.0 | 3.1 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 2 | zf-C3HC4 | 101 | 136 | 6.7e-10 | 38.4 | 3.3 | 1400.0 | -1.0 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 2 | zf-C3HC4_2 | 101 | 131 | 2.0e-08 | 34.1 | 0.74 | 310.0 | 1.4 |
| pfu_aug2.0_202.1_07154.t1 | 3 | 2 | zf-RING_2 | 101 | 135 | 9.7e-08 | 31.7 | 1.1 | 460.0 | 0.7 |
| pfu_aug2.0_202.1_07154.t1 | 2 | 2 | zf-RING_5 | 101 | 129 | 6.8e-07 | 28.9 | 0.32 | 140.0 | 2.3 |
| pfu_aug2.0_202.1_07154.t1 | 3 | 3 | zf-RING_2 | 176 | 194 | 9.7e-08 | 31.7 | 7.0 | 3000.0 | -1.9 |
Transcript
| Transcript ID | pfu_aug2.0_202.1_07154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07154.t1 atggcctcgtcgactgaaaaatcgacaaatgtagaccttactacctgttctatttgttttgagacttttaaaactcccaa atattttccgtgtttacacagcttttgtgaaggatgtatacaaacttatattacaaagactttcgtacaatcaaaaggcg gagtaaattgtcccgtgtgtcggatttttgtttccaaaccggaggatatcagcatagaggaatggtcatcaaaactacct acaaaccatattctggttagtcttattgatatgaatcaatcaaattcagatgaaaaattatgtacagcttgttcaaggga aaacgaaaccgaaagtgcttgttcgtggtgtattaactgtactgagttattatgcaaggcatgtgaccgctcgcatcgta gaaacaaatacaccaacacacataaactggttgatctttcaaatcctcaaacgagcgaaataaagttacataaagctgat atacaatgcacagaacatccggataaaaatgtagaagcgtactgtagagatcattccgagatttgttgtatgacatgcgc attcctcaagcacagaaattgtaaaaatgttggatccatacaagatgcagcgcaggagatgaagaaatcaaatgatgtag aaacctttgcagattctctaaacgaatttaagaactctttggatgagatgttacaatacacgacaaaaaacttacaagac ttcgacaaagacatcgaggaaatgaagtcagatgtcgaaacattatttacaaagttatccaatcatctgagtcagttgaa agcacacattatgtctgaaatatcaaagattgagaaagaggtccgaccagagatagaggataaacatgaagaaatcaaat gtaaaatatcgactatagagaatgacttagccctatttcagaccaacatgaagtacgccccgcccgcccagttcctacaa gccatcgaaaaactaatagagcaaaggttggtactagaaaagtttgtgaaagaggaaagcctaaaataa |
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Protein
| Protein ID | pfu_aug2.0_202.1_07154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_202.1_07154.t1 MASSTEKSTNVDLTTCSICFETFKTPKYFPCLHSFCEGCIQTYITKTFVQSKGGVNCPVCRIFVSKPEDISIEEWSSKLP TNHILVSLIDMNQSNSDEKLCTACSRENETESACSWCINCTELLCKACDRSHRRNKYTNTHKLVDLSNPQTSEIKLHKAD IQCTEHPDKNVEAYCRDHSEICCMTCAFLKHRNCKNVGSIQDAAQEMKKSNDVETFADSLNEFKNSLDEMLQYTTKNLQD FDKDIEEMKSDVETLFTKLSNHLSQLKAHIMSEISKIEKEVRPEIEDKHEEIKCKISTIENDLALFQTNMKYAPPAQFLQ AIEKLIEQRLVLEKFVKEESLK |
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