Gene
Gene Model ID | pfu_aug2.0_2024.1_15361 |
---|---|
Locus | scaffold2024.1 : 82392 ... 103335 : - |
To GenomeBrowser | scaffold2024.1:82392..103335 |
Genes list of scaffold | scaffold2024.1 |
Synonym | pfu_aug1.0_16.1_07286 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2024.1_15361.t1 | 1 | 1 | Fibrinogen_C | 5 | 203 | 0.0 | 220.6 | 0.0 | 0.0 | 220.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2024.1_15361.t1 | gi|340383283|ref|XP_003390147.1| | PREDICTED: ryncolin-2-like [Amphimedon queenslandica] | 0.0 |
pfu_aug2.0_2024.1_15361.t1 | gi|597733286|ref|XP_007228962.1| | PREDICTED: fibrinogen C domain-containing protein 1-like isoform X1 [Astyanax mexicanus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_2024.1_15361.t1 |
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Definition | - |
>pfu_aug2.0_2024.1_15361.t1 atgttcccaggtagcaggtccggggtatatcagatctatccaggaggtatagggattggagtacacgtgtactgtgacat ggcagagtcatgtggagggtggacggtgatacagcgaagaatggatgggaccggcattttttacagagattgggcagact acaagagaggttttgggaaaccagacaggaactattggctaggcaacgacatcatcaatcaactgacagccgacagaaaa caacatgagttgctgatagtccttgaggactttgatgacacagtgagatatgctcattacagaactttctctatcggaaa tgagaaggaaaaatacaaactaaatgtaacgggatacagcgggaatgcaggtgatagtttagcctatcataatggattgc cattcagcacacatgaccaggacaatgacagcgattcagaaaggaattgcgcggtcacctataaaggagcttggtggtac aagaactgccatctctccaatctgaatggcgcatacctcagaggtcaaacttccgatgccgatggcatggtatgggggac ctggaggactgatcgctactcactaaattcaacagtaatgatgattcgataa |
Protein
Protein ID | pfu_aug2.0_2024.1_15361.t1 |
---|---|
Definition | - |
>pfu_aug2.0_2024.1_15361.t1 MFPGSRSGVYQIYPGGIGIGVHVYCDMAESCGGWTVIQRRMDGTGIFYRDWADYKRGFGKPDRNYWLGNDIINQLTADRK QHELLIVLEDFDDTVRYAHYRTFSIGNEKEKYKLNVTGYSGNAGDSLAYHNGLPFSTHDQDNDSDSERNCAVTYKGAWWY KNCHLSNLNGAYLRGQTSDADGMVWGTWRTDRYSLNSTVMMIR |