Gene
| Gene Model ID | pfu_aug2.0_2024.1_15361 |
|---|---|
| Locus | scaffold2024.1 : 82392 ... 103335 : - |
| To GenomeBrowser | scaffold2024.1:82392..103335 |
| Genes list of scaffold | scaffold2024.1 |
| Synonym | pfu_aug1.0_16.1_07286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2024.1_15361.t1 | 1 | 1 | Fibrinogen_C | 5 | 203 | 0.0 | 220.6 | 0.0 | 0.0 | 220.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2024.1_15361.t1 | gi|340383283|ref|XP_003390147.1| | PREDICTED: ryncolin-2-like [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_2024.1_15361.t1 | gi|597733286|ref|XP_007228962.1| | PREDICTED: fibrinogen C domain-containing protein 1-like isoform X1 [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2024.1_15361.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2024.1_15361.t1 atgttcccaggtagcaggtccggggtatatcagatctatccaggaggtatagggattggagtacacgtgtactgtgacat ggcagagtcatgtggagggtggacggtgatacagcgaagaatggatgggaccggcattttttacagagattgggcagact acaagagaggttttgggaaaccagacaggaactattggctaggcaacgacatcatcaatcaactgacagccgacagaaaa caacatgagttgctgatagtccttgaggactttgatgacacagtgagatatgctcattacagaactttctctatcggaaa tgagaaggaaaaatacaaactaaatgtaacgggatacagcgggaatgcaggtgatagtttagcctatcataatggattgc cattcagcacacatgaccaggacaatgacagcgattcagaaaggaattgcgcggtcacctataaaggagcttggtggtac aagaactgccatctctccaatctgaatggcgcatacctcagaggtcaaacttccgatgccgatggcatggtatgggggac ctggaggactgatcgctactcactaaattcaacagtaatgatgattcgataa |
|
Protein
| Protein ID | pfu_aug2.0_2024.1_15361.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2024.1_15361.t1 MFPGSRSGVYQIYPGGIGIGVHVYCDMAESCGGWTVIQRRMDGTGIFYRDWADYKRGFGKPDRNYWLGNDIINQLTADRK QHELLIVLEDFDDTVRYAHYRTFSIGNEKEKYKLNVTGYSGNAGDSLAYHNGLPFSTHDQDNDSDSERNCAVTYKGAWWY KNCHLSNLNGAYLRGQTSDADGMVWGTWRTDRYSLNSTVMMIR |
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