Gene
| Gene Model ID | pfu_aug2.0_2027.1_25258 |
|---|---|
| Locus | scaffold2027.1 : 20686 ... 32264 : + |
| To GenomeBrowser | scaffold2027.1:20686..32264 |
| Genes list of scaffold | scaffold2027.1 |
| Synonym | pfu_aug1.0_17119.1_18425 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2027.1_25258.t1 | 3 | 1 | EGF | 763 | 793 | 1.7e-10 | 40.6 | 1.1e-08 | 5.5e-05 | 23.0 |
| pfu_aug2.0_2027.1_25258.t1 | 3 | 2 | EGF | 794 | 808 | 1.7e-10 | 40.6 | 0.052 | 250.0 | 1.7 |
| pfu_aug2.0_2027.1_25258.t1 | 3 | 3 | EGF | 858 | 888 | 1.7e-10 | 40.6 | 4.3e-10 | 2.1e-06 | 27.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2027.1_25258.t1 | gi|260802458|ref|XP_002596109.1| | hypothetical protein BRAFLDRAFT_203173 [Branchiostoma floridae] | 2.0e-21 |
| pfu_aug2.0_2027.1_25258.t1 | gi|602649263|ref|XP_007431040.1| | PREDICTED: delta-like protein C-like [Python bivittatus] | 8.0e-16 |
| pfu_aug2.0_2027.1_25258.t1 | gi|573889269|ref|XP_006632400.1| | PREDICTED: protein jagged-2-like [Lepisosteus oculatus] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_2027.1_25258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2027.1_25258.t1 atgaatatacgggtgatttgttttggagcgcttctggtcgctctgacaattttagttgatggacgaacaatcgtacgcag agatgctcccttgaagaaacatttgaaagaacataaaacgctagaaaccagcctagaaccccacagccgacagcggaggg gatggggatctgttatattttatgggacatcaatcctaatcaggactaccaacgtgggcctaaccctggcagcaattgta tcagatggctgtgtctattaccagagtatatgcgatgaccgggacgccatagaacagctcgacaaagacattgaagctct gaaaactgaatacgacaccgagtatgtaaagagcgccactgattgggtaaaccttcgtgacgcaaacaacaacaatggct acgtcaactactacatcgacgaggcgcttcaagccgtgcagacactggacgatttacagctcctacttacggacaaactt gaattgaaattaccgaatttgtttgcccgttaccaagccaaccagaatctgtcggcagaggactatttgaacatcctggt cgggcagttagaaaccagtttagacgcaaccaaggagatgcttgaaaaccagaagaagggcgagatgatcggcttgctgg tacaaatgctggttgaaacaactttggatagatttgtgacgggatacaagaaggcttacaacgacctacgtctgtatgac aagatggagagccattataatgctctttggacggcagtttttgaggcggatccagcggaagcaagaattctgtcagaccc cacccatcctgattatgaaaatgctctcaagagaaatggactgaaatcaagtgagatcacttcatttgaaagagtcaaaa tggcgcccaaggttttcgttgaaatgtttggcaactccaagaaataccttgctgattcgtacaatagtctgaaagaatgg ggacaggttgaaagttgggatggatttaaagctaaggcattaagcacgctggaaacacctattaataaaatgaaagctgt caaaaactttattttcgattccaactcacgtaaatacacggtggagaatttcaaaatggattggtctacacgtattatga ccggactcggtgccatcgttgacatagtaacccaagccgtgtccgttgccgagtggtcaaaggtcagggatgaaatggcg aatgcaaggtcacaatacgaggaatacaaatccgctttacagacagaaatcaataacattaaagaggagcaggcaaacca gacgatagaatggggcaacatcgtggacactttcaaagagctatctagcgccttcgatggacttatccaaaatgcgtcat cgtatgccgactttgctgacgtcatgggtctcccaaggttacccgtcgattccagtaaccctatgttcagcgttgatgtc aacaccctagaccagacgaaccttattccagctcaagaggcctatgttgaattcttaaaagagaacaataataatttgac agtcgtgaatgacgagatgtcagccagaaataccctgtatactagcgtcgtagacaaaacagatcagaatgaagttgtta gcgaaatccataccgacttaggcgaaatctattcgtttaacccctctgccacaatcaagcaatttggcacagatcttacc aagaaagatgtcgtctgcacaactgcagtgttgagagtggatatggacgaatacgatcattacgatttgacagcttttag acctagctgtgatgtggaccaatcagcattcactactatggaggcggaagcggaagctgctaggaataaggtcatgatgg ataccattgtttacaccgaggtgagtggaggaagttcggccactttgtcagaacttctcagcactgtacagacggcatac tcagtcacgggggatgctgataagatggcgtttggcgccgccctttccgagcaagacattgcttgcagcattgctacaca gtttacagacaaagatatgtacgattacatagatctaacagcttttaggccgtcctgtgacgctgtcaccgcgcaagatt tcgctaccatgcaacaaaatgccgccagtctgagacaacttgacgtcaacgtagagaacagtatgaacatttgtgactct ttcagtttctgtccgtgcgtcagtgtattggcgtcgcaatatggtgcaacggaagcggaagtccaagcctccatcaaacg agtgcgtccaaatctgactcaatactgtagtacaacaggatatgactgcgtgtcgggaccatgccaaaatgaagggacat gtacatccagtataaacgactacacttgccaatgtcccgatcagtactacggaaaaaactgtcacatccattgcccctgt attgctggaacgtgcgtcaacatttctccaggggatatatcaaactccggcgtcttcgttgacggtgtccttattaacgc aaaaccagtgtacccggaatctggcgtcgttctggtgtgcaactgttccagaggaatggagggagcttattgcaacaaaa gtattgacgactgtgtacccggagcctgcatgaacggagggacatgtatagacggagacgattcatacaaatgtttatgt ctcccaggatacttcggcgaaacgtgtggaaataggcatcttcctaaagaagaggattctctggtggcaaagattacttt aggagtgctcatccccttggtggtgggatttatcaccgcgctggtcatttatggaatctacatgtacagacacccagaca aattcggacgatccgcgacatacaaaaattatgtaattgcccgcgagttcgtacgtagaagcataaggcgcatgtccgga agaagaccaagggagaaactagtagcaaacggaagtaaaggtgatgaaaaagacccgaaaagtgacaagtacacagacac atcccaagttaacttgggatttcaagatggcgacgataagcaatacaaaccagccgttccgatatacacaaaagagaact ctgaattttacaatctttctcccgataatgcagctgttgtagcgggacctaatacgtacgatatgattgaacgctcgaaa caagatgacgtccatgattacgaacaaatgaaaccagccaatgagaagccgcaacgtcagcttgggcgggcatacaggaa taaatctactagtggttctggtccagctactcctggtgtagagaagaatgttccttcaccccgaactccgaccaataatc ccgcgatgccgacgccccacacaccgaacgcttactatccgtctccttcgccgcgttcccctcctgctaatatgccagta ccatccccngagggagaaactactgttgtagcgggtcctaatacgtacgatatgattgaacgctcgaaacaagatgacgt ccatgattacgaacaaatgaaaccagccaatgagaagccgcaacgtcagctcgggcgggcatacaggaataaatctacta gtggttctggtccagctactcctggtgtagagaagaatgttccttcaccccgaactccaaccgataaccccgcgatgccg acgccccacacaccgaacgctaactatccgtctccttcgccgcgttcccctcctgctaatatgccagtaccatctccacg aaacgctcctagccaacttatgatgccccctagtggacattaccagaacgagggccaggttagaccgccatctatatcag acgatgagggcaggggtttcggttacaagcccaaatctccctctggtaagggtccttacgaacaacagggtcactctcca gatactcaaaggaatgattataatccacgaggacgtggtcaaagcgtcagttctgataagaatgctcagtaccgagatcc tcgggaaaatacacaacatcaaggaagagatcccgggtataattcgagaggacgtggacctgaggcatctcggaggcagt atccaggagaagcggattacaggtcaaggtcacaggatggacaaagctacgattcggttgataggggaaacatgtatgac aatacagtcagagaccaacgatataacccgagagaccggtacaacacaaaccctgacccacaggatcggtacgcagacta tgaagggaggtccccgggttatagtcaacaaagagggagggatgatatatcaccgggtggttattctaaaaatagatctg acgataggtacaacatggatcacaaacaaccccctccttctgataggcaccaaacgcctagaggtattccgaatgaccgt tataatgatggatatgaaatgccatataatcaacgaaaatccccgagatataccaatgaaggtcaatttcaatacggaaa ccgccaacagaggtcgccatctgataaggattctgaccatgcgcgagttgtatttccggcatcagatggaatggatgaag tgaccatttaa |
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Protein
| Protein ID | pfu_aug2.0_2027.1_25258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2027.1_25258.t1 MNIRVICFGALLVALTILVDGRTIVRRDAPLKKHLKEHKTLETSLEPHSRQRRGWGSVIFYGTSILIRTTNVGLTLAAIV SDGCVYYQSICDDRDAIEQLDKDIEALKTEYDTEYVKSATDWVNLRDANNNNGYVNYYIDEALQAVQTLDDLQLLLTDKL ELKLPNLFARYQANQNLSAEDYLNILVGQLETSLDATKEMLENQKKGEMIGLLVQMLVETTLDRFVTGYKKAYNDLRLYD KMESHYNALWTAVFEADPAEARILSDPTHPDYENALKRNGLKSSEITSFERVKMAPKVFVEMFGNSKKYLADSYNSLKEW GQVESWDGFKAKALSTLETPINKMKAVKNFIFDSNSRKYTVENFKMDWSTRIMTGLGAIVDIVTQAVSVAEWSKVRDEMA NARSQYEEYKSALQTEINNIKEEQANQTIEWGNIVDTFKELSSAFDGLIQNASSYADFADVMGLPRLPVDSSNPMFSVDV NTLDQTNLIPAQEAYVEFLKENNNNLTVVNDEMSARNTLYTSVVDKTDQNEVVSEIHTDLGEIYSFNPSATIKQFGTDLT KKDVVCTTAVLRVDMDEYDHYDLTAFRPSCDVDQSAFTTMEAEAEAARNKVMMDTIVYTEVSGGSSATLSELLSTVQTAY SVTGDADKMAFGAALSEQDIACSIATQFTDKDMYDYIDLTAFRPSCDAVTAQDFATMQQNAASLRQLDVNVENSMNICDS FSFCPCVSVLASQYGATEAEVQASIKRVRPNLTQYCSTTGYDCVSGPCQNEGTCTSSINDYTCQCPDQYYGKNCHIHCPC IAGTCVNISPGDISNSGVFVDGVLINAKPVYPESGVVLVCNCSRGMEGAYCNKSIDDCVPGACMNGGTCIDGDDSYKCLC LPGYFGETCGNRHLPKEEDSLVAKITLGVLIPLVVGFITALVIYGIYMYRHPDKFGRSATYKNYVIAREFVRRSIRRMSG RRPREKLVANGSKGDEKDPKSDKYTDTSQVNLGFQDGDDKQYKPAVPIYTKENSEFYNLSPDNAAVVAGPNTYDMIERSK QDDVHDYEQMKPANEKPQRQLGRAYRNKSTSGSGPATPGVEKNVPSPRTPTNNPAMPTPHTPNAYYPSPSPRSPPANMPV PSXEGETTVVAGPNTYDMIERSKQDDVHDYEQMKPANEKPQRQLGRAYRNKSTSGSGPATPGVEKNVPSPRTPTDNPAMP TPHTPNANYPSPSPRSPPANMPVPSPRNAPSQLMMPPSGHYQNEGQVRPPSISDDEGRGFGYKPKSPSGKGPYEQQGHSP DTQRNDYNPRGRGQSVSSDKNAQYRDPRENTQHQGRDPGYNSRGRGPEASRRQYPGEADYRSRSQDGQSYDSVDRGNMYD NTVRDQRYNPRDRYNTNPDPQDRYADYEGRSPGYSQQRGRDDISPGGYSKNRSDDRYNMDHKQPPPSDRHQTPRGIPNDR YNDGYEMPYNQRKSPRYTNEGQFQYGNRQQRSPSDKDSDHARVVFPASDGMDEVTI |
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