Gene
| Gene Model ID | pfu_aug2.0_2027.1_25261 |
|---|---|
| Locus | scaffold2027.1 : 69134 ... 70285 : - |
| To GenomeBrowser | scaffold2027.1:69134..70285 |
| Genes list of scaffold | scaffold2027.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2027.1_25261.t1 | 1 | 1 | DNA_pol_B_exo1 | 17 | 55 | 3.5e-06 | 26.1 | 9.5e-10 | 4.7e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2027.1_25261.t1 | gi|499027743|ref|XP_004564603.1| | PREDICTED: maternal protein exuperantia-1-like [Maylandia zebra] | 2.0e-20 |
| pfu_aug2.0_2027.1_25261.t1 | gi|548363250|ref|XP_005731510.1| | PREDICTED: uncharacterized protein LOC102202862 [Pundamilia nyererei] | 4.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_2027.1_25261.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2027.1_25261.t1 atgtatgttcatggaaaggaagttcagtgtgtttcccttaatgaggcattgattgacttcttagaattcctgcagtcaaa aagaggtagcatcatattggtgggtcacaacatatcagcctttgacattcctgttctaatgaatagacttaatgaattca acttatgtggagaactctgtagaatagcaaaaggatttgttgataccctaagattgtcaagaagaatgttccctaaagaa gaggtaggtaactacaagcaggaaacacttgtcaacaaattacttggaatgaggtatcccgcccacgacgcatcagaaga tgtaaatgccctttgtgaacttttcaagataaagttactagattcatgctgtaatggagacatatatcatctgagatttc acaatgtcaaatcatcttatgatagacttctgtctttaaaagcaattaccaaaccagttgtcacagctctatctaaagaa ggtattagtgctcatcatttaaaattagctgtaaagaggaacaagtacgttggactgaaatcaattttgaaggaaaacaa gttgtctctaaaacatgcacacaaaatcatggaagtcttttcaggtgaagagtga |
|
Protein
| Protein ID | pfu_aug2.0_2027.1_25261.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2027.1_25261.t1 MYVHGKEVQCVSLNEALIDFLEFLQSKRGSIILVGHNISAFDIPVLMNRLNEFNLCGELCRIAKGFVDTLRLSRRMFPKE EVGNYKQETLVNKLLGMRYPAHDASEDVNALCELFKIKLLDSCCNGDIYHLRFHNVKSSYDRLLSLKAITKPVVTALSKE GISAHHLKLAVKRNKYVGLKSILKENKLSLKHAHKIMEVFSGEE |
|