Gene
| Gene Model ID | pfu_aug2.0_2029.1_32013 |
|---|---|
| Locus | scaffold2029.1 : 15844 ... 26855 : - |
| To GenomeBrowser | scaffold2029.1:15844..26855 |
| Genes list of scaffold | scaffold2029.1 |
| Synonym | pfu_aug1.0_19893.1_54619 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2029.1_32013.t1 | 4 | 1 | AAA_5 | 88 | 115 | 0.0 | 297.7 | 0.00083 | 0.61 | 9.8 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 2 | AAA_5 | 113 | 221 | 0.0 | 297.7 | 5.8e-24 | 4.3e-21 | 75.0 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 1 | Mg_chelatase | 122 | 160 | 2.4e-06 | 26.8 | 0.96 | 710.0 | -0.9 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 2 | Mg_chelatase | 398 | 428 | 2.4e-06 | 26.8 | 4.2e-05 | 0.031 | 13.4 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 3 | AAA_5 | 400 | 560 | 0.0 | 297.7 | 1.5e-33 | 1.1e-30 | 106.1 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 1 | AAA_16 | 400 | 469 | 3.9e-10 | 40.0 | 8.0e-07 | 0.00059 | 19.8 |
| pfu_aug2.0_2029.1_32013.t1 | 2 | 1 | AAA_22 | 402 | 445 | 2.3e-06 | 27.7 | 0.00011 | 0.078 | 13.1 |
| pfu_aug2.0_2029.1_32013.t1 | 2 | 1 | AAA_14 | 402 | 492 | 5.1e-06 | 26.4 | 3.3e-06 | 0.0024 | 17.7 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 2 | AAA_16 | 609 | 664 | 3.9e-10 | 40.0 | 0.56 | 410.0 | 0.8 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 3 | Mg_chelatase | 639 | 672 | 2.4e-06 | 26.8 | 0.51 | 380.0 | 0.0 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 3 | AAA_16 | 731 | 767 | 3.9e-10 | 40.0 | 0.00021 | 0.15 | 11.9 |
| pfu_aug2.0_2029.1_32013.t1 | 2 | 2 | AAA_22 | 732 | 811 | 2.3e-06 | 27.7 | 0.00043 | 0.32 | 11.1 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 4 | Mg_chelatase | 732 | 760 | 2.4e-06 | 26.8 | 0.0085 | 6.3 | 5.9 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 4 | AAA_5 | 733 | 875 | 0.0 | 297.7 | 1.2e-32 | 8.7e-30 | 103.2 |
| pfu_aug2.0_2029.1_32013.t1 | 2 | 2 | AAA_14 | 734 | 822 | 5.1e-06 | 26.4 | 0.028 | 21.0 | 5.0 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 5 | Mg_chelatase | 797 | 829 | 2.4e-06 | 26.8 | 2.0 | 1500.0 | -1.9 |
| pfu_aug2.0_2029.1_32013.t1 | 6 | 6 | Mg_chelatase | 1075 | 1113 | 2.4e-06 | 26.8 | 2.1 | 1600.0 | -2.0 |
| pfu_aug2.0_2029.1_32013.t1 | 4 | 4 | AAA_16 | 1473 | 1496 | 3.9e-10 | 40.0 | 4.8 | 3500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2029.1_32013.t1 | gi|524888604|ref|XP_005100871.1| | PREDICTED: von Willebrand factor A domain-containing protein 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2029.1_32013.t1 | gi|676444919|ref|XP_009050586.1| | hypothetical protein LOTGIDRAFT_213774 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2029.1_32013.t1 | gi|558168405|ref|XP_006124476.1| | PREDICTED: von Willebrand factor A domain-containing protein 8 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_2029.1_32013.t1 | gi|632977476|ref|XP_007905367.1| | PREDICTED: von Willebrand factor A domain-containing protein 8, partial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_2029.1_32013.t1 | gi|573902722|ref|XP_006639085.1| | PREDICTED: von Willebrand factor A domain-containing protein 8-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2029.1_32013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2029.1_32013.t1 atgagtgtcaaccgctcggtggcacgtcttcaggttcttaggaacatcttacaaactggatctcacaaagagctctgtat tagactctgttccaatgatgccaaaaacgggacaaaaactgttgccattggtgatgtttccatagcgatcagagatgctg cctccaaggagctggtgcctgtacgttacctggcagagaatcctccacagtccatacttcaacatttgaaatggatcatg caaaaggatgctcttggacaggatgtcttcctgattggatctcctgggcccttgagaagacaggtggccatgatgtacct ggaactgacccaaagggaaggtaccgcttactacatggaccaatctgctgtcaatgctgcactcaatggacggattctag ttctggaaggaatcgagaaggctgagcgcaacgtcctgccaattctgaataatttgttggaaaacagagagatgcagctg gatgatggtcgatttttgatggcggcagaaagatatgataagttattactagatcataggaaggaagaattagatgccat gaagttggtgagagtcagcgagagatttcgtgtgattgcccttggacatccagtcccaaggtacagggggaatgcactag atccaccattgcggtcaagatttcagtcccgggatgtcaatacaatgccgttcaaagagcaggtggaaatgctacaagag gtctttcagaagataccaacccagaaaatctcacagattgtatcgctgggtaccgctatcaatactaaggagtcgtctgc tgttgggctgcctgactttcctctgtccaatgttccaaaagttgtgaagatactgaacagttcacctgacatgcctgcat ctaaagtcatttcaagactgtatccgcatgaggtcatgcttagcaaggaaggtagaacagcggtaggaaatctgttggag aaatttgacctgacagagaaagagtcttcttcaatatttggtagtaaagatgaggtcatatctggtatagaaaagaaaga cgagaactccagtgtagtaaagacaaacaaaaaacaaaaatttgttgtaccatccggactattgaacagtgcagatataa gggaaccagaagtattcgtcccaacaaagtatcatcagggcttcctagctgaaatgatgcagtcacatctagcacatgac ttttgtattgttggtccaagaggatgtggtaagagtctgcttgtcaacagaatggctcagctattaggatacgaggtgga acagattatgctatatcaggacatgacatcaagggatttgttacagcagaggattacacagcctaatggtgacactgact ggaggttgtccccccttgttgaggcagctttagagggtagactggcagtacttgatggggtacacagaataaatcagggc tcatttgctgtcttacatagactcattcatgatagagagcttcaacttttcgatggtactcgactgatccatcatgatcg ttttgaggcgatgaagcagaagtcagatttgacaacagaagcactgatggagaaaaagattcttccgattcatccctcat ttagaatagcggctttatcagagcctcctgttcctggcagctctagccagcaatggatgacaccagaacttcttacgatg tttttatttcaccatttacgtccactctccttagcagaagaaactcaggttgtacagaaagtagttccaggttgtcctga tatcaagaaattgatgaactttgtgcaccagatgcgcgagtcagcagaccccactatgatgtctatttcttcatcactgt ctaccagacaaatcatcagagtggctaaacgactggctaaattcccatctaaagatcttcatggtatcatccacaaagct tgcttggccaattttcttccaagtcttccaaagataagcttggagcaagctttagaagctgctgagatccgagctcttaa aaactttgaggaaaatacagatactgatgaagcaatcacttgtgaggtaagagatgggagtctcagaattggaaagacgt cagttcctgttttcaatcctgaaaatcgtactaaagtcccagacgttctgttctacgaaaatcctatgcatttgtcagtg atggaagacatgttgaaggactttgaccttggagaacatctactgttggtaggaaatcaaggagtggggaagaataaaat tgtggacagattcttacacctgcttaatcgccctagagagtacattcagctccatagagatacaacagtacagactctca ccctacagcccctggttaaaggtggtgttatagtgtatgaggactctccgcttgtcagagctgtcaaagagggacatgtc ctggttgttgatgaggcagacaaagcaccaactcacgtcacttgtattctgaaaactcttattgaaaccggtgaaatgca tcttgcagatggaagaaggattgtttcccaaaaatcaggaattaagccatctccaagtgtcatcataggccatccagatt tcagaatgattgtccttgcaaacagacctggttttccttttctaggaaatgatttctttggtgccatgggggatatattc agttgtcatgcgattaataatccagatatgaaatcggagatgtctatgctaagaagatatggtccagatgtgccagaaac aacattggagaagctggtacaggcctttggagatctcagaaatatggctgatcagggacttatatcatacccatactcaa cacgtgaagtggttaacattgtgcgtcacttgaataaatatcccaatgatggtctgagaactgtggtcagaaatgtgttt gattttgactcatatagcaaagaactacaagaaaccattgtgaatactatgcaaaggcatggaatcccctttggctccac aaaggcagaagtcaatctagcacagcagtacccgttgccgtcatttcaactgcaaggtgtctggaacattgcagggtctg gcgatagacgtaggacggctccaataagcttgccaatagagacgtcagagattgaccttagaggccctatagaaattgca gttcaggacaaagtaatagaaaggatgacagctagagcaacgacattcacagaacaagaggcattctggactatacccat gcacgatacaaatatcatcagcgatgtagctgtttctaaagccaccaacagtgcatcaagagatactgatattatccata ttgctacagctaatcctatcagcatctactctttgaatcccaagttgtcaacctgcacaatgctggacctatatgacatg tttccaaatgctcacggctcctacagaccaagagttaagctggcaccaatggcagaacctcttgatcattcgttgctctt acatgaagaaatcaccaattctcttctcatggtcaacttcttgtcaggggatgtgactcgcatagtgtcccatgctttac catccactccagtggaaaagagaaggtttccatctgcaattcaacaaaacccaaatccgtatagaatgtgtccaagcaca ctaccagatgccaaaggaagcattatgttctacgagcttggaggggacaacattgtagctttgactggcatgtacaccca ggccatgtcagtgccattcaaggtcaaggacattcatcaaattggcaacaaccagtggttactgaatgatctagagtcaa ataagaagtttttcatggagttgaaaggtactgatgaatttacactacagcctgtacacgaaggagattttatgaaggat atcaggaagattatacaatcattacccatgtggaaggtgccagtctcaattttcccggacaaacagcggccaacaggatt cagtggctttttagaggttgtggatccagccaatcacatccttcgttatataccggtgccatcacccacacgatattccc cgtacacagcgtggttgtatagtatgtcggataccagtgtgtttatagctccggccagtaatgatggactagtcacagta gactcaggaggttgtgtaagactgtgggagacagccttgattaacctggagaggtcactgacagaatggaagaatatgat gggatttgatgatggaaaaccattacaggtgacatatgatagagaaagtggaaggaaagcagatggaccaaagcatggaa agatagaccctaagaacgctccccatgtaggagggaacacgtgggctggaggcacgggaggaagtaacacagctggattg ggtggtcttggagggccatacagacttgacagtggacacacagtgtaccaggtaccccagcatgagaaagatgccgtgcc agaagaagtcagagaggccgcacgagaaatggcccagaaagctttcaaagagaggctacgggaaatcaacatgagcgaat atgatgctgatatgtacgattctttctctggcagcgtcagaagccaagtgcagtcgctacgtgttatactcgacagtcta caggcgaaaggaaaagagagacaatggttgaaaaatcagtcgtatggagatttggatgactcaaaattaattgagggcat taccggtgaaaagtcaatatacaagcgtagaggagagaaggaaccagaactgggtacacctcaggaaaaaccgaaacgtc taagattggtagtggatgtatcaggaagtatgtataggtttaatggttacgacggaagactcgncattggaagaccaggc tga |
|
Protein
| Protein ID | pfu_aug2.0_2029.1_32013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2029.1_32013.t1 MSVNRSVARLQVLRNILQTGSHKELCIRLCSNDAKNGTKTVAIGDVSIAIRDAASKELVPVRYLAENPPQSILQHLKWIM QKDALGQDVFLIGSPGPLRRQVAMMYLELTQREGTAYYMDQSAVNAALNGRILVLEGIEKAERNVLPILNNLLENREMQL DDGRFLMAAERYDKLLLDHRKEELDAMKLVRVSERFRVIALGHPVPRYRGNALDPPLRSRFQSRDVNTMPFKEQVEMLQE VFQKIPTQKISQIVSLGTAINTKESSAVGLPDFPLSNVPKVVKILNSSPDMPASKVISRLYPHEVMLSKEGRTAVGNLLE KFDLTEKESSSIFGSKDEVISGIEKKDENSSVVKTNKKQKFVVPSGLLNSADIREPEVFVPTKYHQGFLAEMMQSHLAHD FCIVGPRGCGKSLLVNRMAQLLGYEVEQIMLYQDMTSRDLLQQRITQPNGDTDWRLSPLVEAALEGRLAVLDGVHRINQG SFAVLHRLIHDRELQLFDGTRLIHHDRFEAMKQKSDLTTEALMEKKILPIHPSFRIAALSEPPVPGSSSQQWMTPELLTM FLFHHLRPLSLAEETQVVQKVVPGCPDIKKLMNFVHQMRESADPTMMSISSSLSTRQIIRVAKRLAKFPSKDLHGIIHKA CLANFLPSLPKISLEQALEAAEIRALKNFEENTDTDEAITCEVRDGSLRIGKTSVPVFNPENRTKVPDVLFYENPMHLSV MEDMLKDFDLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPLVKGGVIVYEDSPLVRAVKEGHV LVVDEADKAPTHVTCILKTLIETGEMHLADGRRIVSQKSGIKPSPSVIIGHPDFRMIVLANRPGFPFLGNDFFGAMGDIF SCHAINNPDMKSEMSMLRRYGPDVPETTLEKLVQAFGDLRNMADQGLISYPYSTREVVNIVRHLNKYPNDGLRTVVRNVF DFDSYSKELQETIVNTMQRHGIPFGSTKAEVNLAQQYPLPSFQLQGVWNIAGSGDRRRTAPISLPIETSEIDLRGPIEIA VQDKVIERMTARATTFTEQEAFWTIPMHDTNIISDVAVSKATNSASRDTDIIHIATANPISIYSLNPKLSTCTMLDLYDM FPNAHGSYRPRVKLAPMAEPLDHSLLLHEEITNSLLMVNFLSGDVTRIVSHALPSTPVEKRRFPSAIQQNPNPYRMCPST LPDAKGSIMFYELGGDNIVALTGMYTQAMSVPFKVKDIHQIGNNQWLLNDLESNKKFFMELKGTDEFTLQPVHEGDFMKD IRKIIQSLPMWKVPVSIFPDKQRPTGFSGFLEVVDPANHILRYIPVPSPTRYSPYTAWLYSMSDTSVFIAPASNDGLVTV DSGGCVRLWETALINLERSLTEWKNMMGFDDGKPLQVTYDRESGRKADGPKHGKIDPKNAPHVGGNTWAGGTGGSNTAGL GGLGGPYRLDSGHTVYQVPQHEKDAVPEEVREAAREMAQKAFKERLREINMSEYDADMYDSFSGSVRSQVQSLRVILDSL QAKGKERQWLKNQSYGDLDDSKLIEGITGEKSIYKRRGEKEPELGTPQEKPKRLRLVVDVSGSMYRFNGYDGRLXIGRPG |
|