Gene
| Gene Model ID | pfu_aug2.0_2029.1_32014 |
|---|---|
| Locus | scaffold2029.1 : 29547 ... 42155 : - |
| To GenomeBrowser | scaffold2029.1:29547..42155 |
| Genes list of scaffold | scaffold2029.1 |
| Synonym | pfu_aug1.0_39611.1_63008 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2029.1_32014.t1 | 1 | 1 | DUF4506 | 48 | 180 | 1.2e-11 | 44.3 | 5.2e-15 | 1.9e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2029.1_32014.t1 | gi|676471005|ref|XP_009059039.1| | hypothetical protein LOTGIDRAFT_164294 [Lottia gigantea] | 6.0e-23 |
| pfu_aug2.0_2029.1_32014.t1 | gi|524875283|ref|XP_005094372.1| | PREDICTED: uncharacterized protein LOC101855549 [Aplysia californica] | 9.0e-21 |
| pfu_aug2.0_2029.1_32014.t1 | gi|597797029|ref|XP_007260092.1| | PREDICTED: uncharacterized protein C10orf88 homolog [Astyanax mexicanus] | 9.0e-18 |
| pfu_aug2.0_2029.1_32014.t1 | gi|585686695|ref|XP_006820373.1| | PREDICTED: uncharacterized protein C10orf88-like [Saccoglossus kowalevskii] | 1.0e-15 |
| pfu_aug2.0_2029.1_32014.t1 | gi|125830716|ref|XP_699238.2| | PREDICTED: uncharacterized protein C10orf88 homolog [Danio rerio] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_2029.1_32014.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2029.1_32014.t1 atgtcatgtgttgactactgtacagtcttgccatcttgggattttgaaaaagatccagcggaaattgtgacatatttctt tggacaggagtgtagggctggtgaggaggatgatagtgatctatcaagctctcaataaacggacagtggagaaaatgaac ctcttgtgatttcagtgacatgcaagccacagtatcgtgtcagtgtgtgcggaatacatgtcgtcagtaacacaagaatt gttgaactctatgacactagcgagggttacctttgcagtgtgcgggggtctgtattggacacacctttggatgaggaggg tggagaagagacagaaacagtgtacaggtgtaggagaagacttgaagaagcacagtttggtctatctataaaatttccaa agacggggaatttgagcttgatcaacatataccagatagttctgattcttcaccctgagctggaggatgatcatccagag ccaagctgtaacggcatgataaacatggcaaaggtcaaggactacgtcacaggcatgggggataatatttcagacaacgc aagaatgctgatgaaaaatgtggaagagtatcaaaagcaaagacaatcaggattacatggaatgctggccaacatgggtg gaggaggtggacaaggaatggaaatgatgggactcatgtctatgttctcaatgttaggaagaagtgaccaatcacaagca aggtcacaaaacgacagcactttgaatggccaatctgcgagcccattgcatgatggacatggaacagggaatcagatagg cttacaatcagccaatcagatgtccagattagagcagttactccagagtagcagaaacagtgctaagaatgagggtgttg atggggaggatccaggaaataatgaaatgtttggaatgctgaggaacatttgtagtaaagtgacaaaagctagggaagct gagaagaaaagtaacgaatcccatcaagaaagtggagaggaacaagaaacaacaactgaagatcaaaattctcaaagcaa ctctcagatatgtgaaaaatcagaaagtgtcgtgaatgaaagaacaggtgacactgacgttaataaaagactcgaagagg tgaaagaagctgaagagaggcttaaaaatcattttgattccagactgtcagaaatggaggagaaaatctgcagtaaaatg gagcaaattttacagttgtttcataataatgggagatctacgccatcctga |
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Protein
| Protein ID | pfu_aug2.0_2029.1_32014.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2029.1_32014.t1 MSCVDYCTVLPSWDFEKDPAEIVTYFFGQECRAGEEDDSDLSSSQXTDSGENEPLVISVTCKPQYRVSVCGIHVVSNTRI VELYDTSEGYLCSVRGSVLDTPLDEEGGEETETVYRCRRRLEEAQFGLSIKFPKTGNLSLINIYQIVLILHPELEDDHPE PSCNGMINMAKVKDYVTGMGDNISDNARMLMKNVEEYQKQRQSGLHGMLANMGGGGGQGMEMMGLMSMFSMLGRSDQSQA RSQNDSTLNGQSASPLHDGHGTGNQIGLQSANQMSRLEQLLQSSRNSAKNEGVDGEDPGNNEMFGMLRNICSKVTKAREA EKKSNESHQESGEEQETTTEDQNSQSNSQICEKSESVVNERTGDTDVNKRLEEVKEAEERLKNHFDSRLSEMEEKICSKM EQILQLFHNNGRSTPS |
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