Gene
| Gene Model ID | pfu_aug2.0_2030.1_01955 |
|---|---|
| Locus | scaffold2030.1 : 1 ... 7665 : - |
| To GenomeBrowser | scaffold2030.1:1..7665 |
| Genes list of scaffold | scaffold2030.1 |
| Synonym | pfu_aug1.0_2837.1_08437 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hras-like suppressor 3- partial | GO:0004620 GO:0005737 GO:0016020 GO:0044763 GO:0052689 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2030.1_01955.t1 | 1 | 1 | LRAT | 15 | 135 | 1.7e-29 | 102.3 | 4.5e-33 | 2.2e-29 | 101.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2030.1_01955.t1 | gi|524864046|ref|XP_005088861.1| | PREDICTED: HRAS-like suppressor 3-like isoform X1 [Aplysia californica] | 1.0e-33 |
| pfu_aug2.0_2030.1_01955.t1 | gi|676464887|ref|XP_009057065.1| | hypothetical protein LOTGIDRAFT_162789 [Lottia gigantea] | 1.0e-31 |
| pfu_aug2.0_2030.1_01955.t1 | gi|260811516|ref|XP_002600468.1| | hypothetical protein BRAFLDRAFT_119296 [Branchiostoma floridae] | 4.0e-27 |
| pfu_aug2.0_2030.1_01955.t1 | gi|664781603|ref|XP_008510117.1| | PREDICTED: HRAS-like suppressor 3, partial [Equus przewalskii] | 5.0e-26 |
| pfu_aug2.0_2030.1_01955.t1 | gi|585645955|ref|XP_006811652.1| | PREDICTED: HRAS-like suppressor 3-like, partial [Saccoglossus kowalevskii] | 6.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_2030.1_01955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2030.1_01955.t1 atgaagtcaagcgttgatcttttaaataaaatagttatggacgatgctaagcctgcagaccagatcgaatttaagagagg tatctattcacactgggcgttatacgtcggtgatggagaggtaatacatctggccggagacgatgccgttcaactaagtt ccaaagcttcatcgacatcatgttgcggtgtaagcagtacgacaatcgcaaaagcatctgtgcgtagagatcgtttcatg gatgttgcaggaaactccaaggctgtcattaacaattcaaaggacaaacgattctgcccaaaaccaacagcggatattct aagatatgcaagagaacagattggaaaaaagggatacaatttattcttcagaaactgtgaacactttgcatcgtattgca gataccggatagcaacatctgatcag |
|
Protein
| Protein ID | pfu_aug2.0_2030.1_01955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2030.1_01955.t1 MKSSVDLLNKIVMDDAKPADQIEFKRGIYSHWALYVGDGEVIHLAGDDAVQLSSKASSTSCCGVSSTTIAKASVRRDRFM DVAGNSKAVINNSKDKRFCPKPTADILRYAREQIGKKGYNLFFRNCEHFASYCRYRIATSDQ |
|