Gene
| Gene Model ID | pfu_aug2.0_2030.1_01960 |
|---|---|
| Locus | scaffold2030.1 : 80027 ... 90985 : - |
| To GenomeBrowser | scaffold2030.1:80027..90985 |
| Genes list of scaffold | scaffold2030.1 |
| Synonym | pfu_aug1.0_10813.1_24800 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gem-associated protein 6 | GO:0005634 GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2030.1_01960.t1 | 1 | 1 | Gemin6 | 14 | 173 | 3.79752e-43 | 146.6 | 0.0 | 4.80645e-43 | 146.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2030.1_01960.t1 | gi|676485030|ref|XP_009063529.1| | hypothetical protein LOTGIDRAFT_221243 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2030.1_01960.t1 | gi|260830290|ref|XP_002610094.1| | hypothetical protein BRAFLDRAFT_60087 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2030.1_01960.t1 | gi|524889283|ref|XP_005101202.1| | PREDICTED: gem-associated protein 6-like [Aplysia californica] | 9.80909e-45 |
| pfu_aug2.0_2030.1_01960.t1 | gi|291240063|ref|XP_002739938.1| | PREDICTED: gem-associated protein 6-like [Saccoglossus kowalevskii] | 9.94922e-44 |
| pfu_aug2.0_2030.1_01960.t1 | gi|704549512|ref|XP_010179248.1| | PREDICTED: gem-associated protein 6 [Mesitornis unicolor] | 9.99995e-41 |
Transcript
| Transcript ID | pfu_aug2.0_2030.1_01960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2030.1_01960.t1 atggcagaagttatcaatggtgatcagcatcctattttcaagtgtgatccagaggaatggatgcagtatgtttataaaca agtacgtgtatctaaggatgacggcacagaggctacaggatgggtgtacactattgatcctgtgactcaaagcttcgttc ttgtctcatttttggacgacaaatctcaaatggagatggtgatgggaccttcggtacaaagagtgacagtacttgatgaa aattgtgaaacttacaaaaagaaactggacagtttgttcagaaatgaagaagttgcgagcctttcagaagaggaattgga agcaaggaaaaataaactgaagttgtggttgtgtaaaaaccgtctaccagtgcaggtttctgggaacaatggtgagatgt tgtcagtttctgatgctttgttcatagagccaccttacggaccagataactgtagaagcaccaatgaaataattctgggt cgtattcaaggcttgataaagaacatgcctgttgaccaagaagagtggtga |
|
Protein
| Protein ID | pfu_aug2.0_2030.1_01960.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2030.1_01960.t1 MAEVINGDQHPIFKCDPEEWMQYVYKQVRVSKDDGTEATGWVYTIDPVTQSFVLVSFLDDKSQMEMVMGPSVQRVTVLDE NCETYKKKLDSLFRNEEVASLSEEELEARKNKLKLWLCKNRLPVQVSGNNGEMLSVSDALFIEPPYGPDNCRSTNEIILG RIQGLIKNMPVDQEEW |
|