Gene
| Gene Model ID | pfu_aug2.0_204.1_13792 |
|---|---|
| Locus | scaffold204.1 : 222903 ... 266756 : - |
| To GenomeBrowser | scaffold204.1:222903..266756 |
| Genes list of scaffold | scaffold204.1 |
| Synonym | pfu_aug1.0_29342.1_26460 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_204.1_13792.t1 | 2 | 1 | TSP_1 | 69 | 73 | 2.5e-09 | 37.1 | 6.0 | 15000.0 | -8.8 |
| pfu_aug2.0_204.1_13792.t1 | 2 | 2 | TSP_1 | 88 | 136 | 2.5e-09 | 37.1 | 1.0e-12 | 2.5e-09 | 37.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_204.1_13792.t1 | gi|676483858|ref|XP_009063160.1| | hypothetical protein LOTGIDRAFT_207116 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_204.1_13792.t1 | gi|524899882|ref|XP_005106367.1| | PREDICTED: UBX domain-containing protein 1-A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_204.1_13792.t1 | gi|755933841|ref|XP_011314778.1| | PREDICTED: UBX domain-containing protein 1 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_204.1_13792.t1 | gi|260830579|ref|XP_002610238.1| | hypothetical protein BRAFLDRAFT_116266 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_204.1_13792.t1 | gi|157115253|ref|XP_001658165.1| | AAEL001154-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_204.1_13792.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_204.1_13792.t1 atggagggaacaaaattaggagtagctttgttcatctgtacagttgttattttgtgcctcagtaatggagtatctagctt taggacttgcgccgaggcccgctattgttgcccgggcagaaataacacttgctttgcatttgggcctcgtatggatcgta acattaatgaaacccgatgtttctgtgaccagaattgtgtagagatgaaggactgttgtattgactatcaagccacctgt gaaggtaaagattgtgtagtgtcagaatggggaccctggtcacaatgtaacgcattgtgcgggttaggtagtcaaaagcg gaaacggaagccgatcagaaagagacaacatggtggccaagactgtccggttctccaagaaaagcgcgcatgcgtaggag atcggtgctacgaaatacaaagtgtagaatatcagggcagggaacttagagaggttggtcaaatcattcctcagcggttt tcatcatggaggaacagtcccgagtacagtcctaaactagacatccggtctaaccttcaggatcccagcaacgaagtacc aactagactagcccaaaaagctctggcaaaaacaggatacaaaggtgtacaacttgcaatggactggttatttgctcatg aagacgatgcagatattgatgaagcatttcaaaccccacaaggtcacacccttggtggtacccagtcagaacctcagccc tcagtacagaatagtgatagtaatatggaggcggctccagtaagtggtccctcggatgctgcctctggggaaccacagct ccaagctagatctcttaagtgtgatgtatgtggtaagttattgaagagtgagttagatgcccaggcgcacgctgcccgaa cacaacatgacagtttctctgagtctacggaagaaatcaaacctcttacagaggaggagaaaaaacaacaactagaaaaa ctacaagaaagattgaagcaaaaacgattagagagagaggagcaggagaaaagggatcaactagaaagagaaaaagctcg aaggagaacaggcaaagagattgtagatgttaggtcaaaggttgaagaaaatgaaataaagaaattagcagaacaaagaa gaagggagaaaatggaagacaaattagccagacaaaaaatcaaggaacaaattgaaaaagataaaagagacagagctgca aagtttgcaccacagaagtctaaccctgcccccgctccagctgctgcccctgtagccacacccgctgcacctgcagagaa aaaagattacaaggattgtagactacaggtccagtattcacggccaaacttacaaaattgatactgcgcaacgttcaaga tcacagagactcgcaccagatgtaacacgaccgtgtctgagcgtcagtgggctaacgtcatgcagccgggtactgaggtg tgtgtccagtgtgacccattcgccatgagtaaagacctcggaacacgatgtataggacacggtgtccacaaccatgaaac aaaatggaaagcggtccacgtgccatactgcaacgggaagtggatgatgatttctaaacacaaagagtgcacatgtcatc taaatccgggattcgatttcatcctcgtgtga |
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Protein
| Protein ID | pfu_aug2.0_204.1_13792.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_204.1_13792.t1 MEGTKLGVALFICTVVILCLSNGVSSFRTCAEARYCCPGRNNTCFAFGPRMDRNINETRCFCDQNCVEMKDCCIDYQATC EGKDCVVSEWGPWSQCNALCGLGSQKRKRKPIRKRQHGGQDCPVLQEKRACVGDRCYEIQSVEYQGRELREVGQIIPQRF SSWRNSPEYSPKLDIRSNLQDPSNEVPTRLAQKALAKTGYKGVQLAMDWLFAHEDDADIDEAFQTPQGHTLGGTQSEPQP SVQNSDSNMEAAPVSGPSDAASGEPQLQARSLKCDVCGKLLKSELDAQAHAARTQHDSFSESTEEIKPLTEEEKKQQLEK LQERLKQKRLEREEQEKRDQLEREKARRRTGKEIVDVRSKVEENEIKKLAEQRRREKMEDKLARQKIKEQIEKDKRDRAA KFAPQKSNPAPAPAAAPVATPAAPAEKKDYKDCRLQVQYSRPNLQNXYCATFKITETRTRCNTTVSERQWANVMQPGTEV CVQCDPFAMSKDLGTRCIGHGVHNHETKWKAVHVPYCNGKWMMISKHKECTCHLNPGFDFILV |
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