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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_20404.1_16620
Locus scaffold20404.1 : 1 ... 1315 : +
To GenomeBrowser scaffold20404.1:1..1315
Genes list of scaffold scaffold20404.1
Synonym pfu_aug1.0_50581.1_20085

Manual annotation
Annotation by Blast2GO
Annotation GO
pantothenate kinase 4-like GO:0004594 GO:0005524 GO:0015937 GO:0016310

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_20404.1_16620.t1 1 1 Fumble 1 61 1.1e-17 63.9 7.7e-22 1.1e-17 63.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_20404.1_16620.t1 gi|676453181|ref|XP_009053272.1| hypothetical protein LOTGIDRAFT_116077 [Lottia gigantea] 1.0e-26
pfu_aug2.0_20404.1_16620.t1 gi|524892515|ref|XP_005102785.1| PREDICTED: pantothenate kinase 4-like [Aplysia californica] 2.0e-26
pfu_aug2.0_20404.1_16620.t1 gi|662199153|ref|XP_008472729.1| PREDICTED: pantothenate kinase 4 [Diaphorina citri] 3.0e-26
pfu_aug2.0_20404.1_16620.t1 gi|241304597|ref|XP_002407616.1| pantothenate kinase, putative [Ixodes scapularis] 9.0e-26
pfu_aug2.0_20404.1_16620.t1 gi|328703062|ref|XP_001952497.2| PREDICTED: pantothenate kinase 4 [Acyrthosiphon pisum] 8.0e-25

Transcript
Transcript IDpfu_aug2.0_20404.1_16620.t1
Definition-
>pfu_aug2.0_20404.1_16620.t1
agtggagagggaggatgaaatgatctgtctcatagaaggttgtaatttcttgctcaaaaacattgctgacgaagcctttg
tttaccagcggcatggccagccggaatataaattccagggagtagatccgaacatatttccatatttactggtcagtatt
ggatctggtgttagtctagtcaag

Protein
Protein IDpfu_aug2.0_20404.1_16620.t1
Definition-
>pfu_aug2.0_20404.1_16620.t1
VEREDEMICLIEGCNFLLKNIADEAFVYQRHGQPEYKFQGVDPNIFPYLLVSIGSGVSLVK

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